Salvia hispanica (chia): 125189471
Help
Entry
125189471 CDS
T09851
Name
(RefSeq) polygalacturonase ADPG1-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis00040
Pentose and glucuronate interconversions
shis01100
Metabolic pathways
Module
shis_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
125189471
Enzymes [BR:
shis01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
125189471
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
BA_2335-like
Motif
Other DBs
NCBI-GeneID:
125189471
NCBI-ProteinID:
XP_047942702
LinkDB
All DBs
Position
5:13737852..13740118
Genome browser
AA seq
436 aa
AA seq
DB search
MCVCESERDREKCSSKLAINICVNLAYFMDVVIGVLLLVFASSSSPILTCGIDEHYFDVI
NYGATGDGCTDDSQAFVEAWDAACSSSLQSATLYVPPETIFLVHPLIFHGPCNPTIINFS
ILGTMIAPESPSSWDERDASQWMAFTNIDGLNIDGYGYGVVDGRGKTWWDQSCRYHPLLE
NCTTLAPTAWKFLGCNDSSVRNVKFINSAQTHMLVKGCNDFIIENVIIESPENSPNTDGI
HIQSSHHLLITNSTIACGDDCISIGDYISDMEISKIQCGPGHGISIGSLGRGGNYVQVEN
IQISNAIFNGTTNGARIKTWQVGRGYVRRVTFEKLVLHNVKNPIIIDQNYCNIRGACQEQ
ESGVEISNIVYREIQGTSASKIAINLNCSNWVPCYGIWMESIELTSAIAGKQVTANCSNA
SGREQGTLPGPCLRQY
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtgtgtgagagtgagagagatagagagaagtgcagcagcaagctagcaatcaac
atttgtgttaatttggcatatttcatggatgttgtgattggagtgttgttattggtgttc
gcttcgtcgtcttcaccaatccttacctgcggcattgatgaacattatttcgatgtcatc
aactatggagccactggtgatggttgtacagatgattcacaggcatttgtagaggcatgg
gatgcagcttgtagttcttcacttcaatctgcaacactatatgttccgccggagaccata
tttctagttcaccccctcatctttcacggcccttgcaatccaacgatcatcaatttctcg
attttagggacaatgatagcaccagagtcaccaagctcgtgggatgaaagagatgcaagt
caatggatggcatttacgaatatcgatggccttaacatcgatggctatggctatggcgtc
gtagatgggagaggcaagacttggtgggatcagtcttgtagataccatcctcttttggaa
aattgcacaactttagctccaacagcgtggaagtttttagggtgcaacgatagcagcgtt
aggaacgtgaagtttataaatagtgcccaaacacatatgctggtgaaagggtgcaacgat
ttcatcattgagaatgtgattattgagtctcctgaaaatagccccaacacagatggtatt
cacattcaatcatctcaccatcttctcatcacaaattctacaatagcctgcggcgatgat
tgtatctcaattggtgactacatttctgatatggagataagcaaaattcaatgtggccct
ggtcatggaatcagcattggaagcttaggaaggggaggaaactatgtacaagtggaaaac
attcaaataagcaatgccatcttcaacggaactacaaatggcgctcggatcaaaacatgg
caggttggaagaggatatgtacggcgcgtcacatttgaaaaactggtactccacaacgtc
aagaatcccatcatcatcgaccagaattactgcaacatcaggggtgcatgccaagagcaa
gaatccggagttgaaataagcaatatagtgtatcgagaaatacaagggacatcagcttcg
aagatcgccatcaatcttaactgtagtaattgggtaccatgttatggaatatggatggaa
tcaatagagttaacatcagctatagctgggaagcaagttactgcaaattgcagcaatgct
tctggtcgagagcaaggcacgcttcctggcccatgtcttcggcaatactaa
DBGET
integrated database retrieval system