Salvia hispanica (chia): 125189580
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Entry
125189580 CDS
T09851
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 21-like
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
shis01002
]
125189580
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shis04121
]
125189580
Enzymes [BR:
shis01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
125189580
Peptidases and inhibitors [BR:
shis01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
125189580
Ubiquitin system [BR:
shis04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
125189580
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
DUF7351
Motif
Other DBs
NCBI-GeneID:
125189580
NCBI-ProteinID:
XP_047942800
LinkDB
All DBs
Position
5:complement(19843450..19845377)
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AA seq
489 aa
AA seq
DB search
MADDDLYVYYMPDDVNDTRALSSHKPPDKSAHDLSNHAILGVGLENLGNTCFMNSVLQCX
HTVPLLQPIFSTQSTNNLMCTDNKKQFCLLNALRDLIFQCLVSNATVSPVDLVNNLTYTS
SNFKRSQQEDAHEFFQCFLDRLGSCHERGYSIVQRVFGGCLVSNLMCCNCGHCSDTYEPS
IDLSLEIDDADNLFNALYSFTKVERIGDPQTKFKCQKCKERVYVEKKLSFARHPQVALLH
LKRFINHGSFVQKIDKHVAFPLDLDLQPFTRRANHNHVSEDLEYVLYAVVVHVGLSPTSG
HYYCYIRLSAGIWFCFDDSKVELVDEEYVLSQEAYLLFYAKKSTPWFSSFIETQKEFLYS
TTWHTSPVSVLDNSMSPYSDNRFSISWNTGRGRIKDIGVRNETKGIVSIAPHQKLSPVKF
EKANYKKEVSVPQKTPIDIEAILRSPSPEIDIKDSPGFSFFRRHLRNADRLSCKRRLEED
MDAHPEMVA
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgacgatttatacgtgtactacatgccggatgatgtgaacgatactcgtgcc
ttatcttcgcataagccaccagacaaatctgcacatgacttgtctaatcatgctatctta
ggagttggcctggaaaatttaggcaacacttgctttatgaattcagttttgcagtgtnnt
cacactgttccacttcttcaaccaattttctcaactcaatctaccaataacttaatgtgt
acagataataagaagcagttttgtttgctaaatgcactgcgggatttgatttttcaatgt
cttgtttcgaatgccactgtctctcctgtagatcttgtcaacaatttaacttatacatca
tcgaacttcaaaagatcacagcaggaagatgctcatgaattctttcagtgctttttggat
aggctcggttcatgtcatgaacggggctatagcatagtgcaacgagtatttggcggttgt
cttgtcagcaatttaatgtgttgtaactgtggtcactgctcggacacttatgaaccatca
atcgacctgagtttggagatcgatgatgcggacaatttgtttaatgctctctactctttc
acaaaggttgaaaggataggagatccgcagactaagtttaaatgtcaaaaatgtaaagag
cgagtgtacgttgagaagaaactttccttcgcccggcatcctcaagtagcgctacttcat
ttgaagaggttcataaatcatggcagttttgttcaaaagatcgataaacatgtcgcattt
cccttagatttggatttgcagcctttcactcgccgcgccaatcataatcatgtgagtgaa
gatcttgaatatgtgctctatgctgttgtggtgcacgtcggattaagtcctacatctggc
cactactactgctatatacgcttatctgctggcatatggttttgttttgatgattcaaag
gttgagctggtcgatgaagaatatgtgctatcacaagaggcttatctcctcttctatgca
aaaaaaagcactccctggttttcaagtttcattgaaacacagaaagaatttttatattca
actacgtggcacacatcgcctgtatccgtgttagacaactcaatgtctccctattcggac
aacaggtttagcataagttggaatacgggaagaggacgcatcaaagatattggtgtgagg
aatgaaactaaggggatagtaagcatagcaccacaccaaaaactgtctccagttaaattt
gaaaaggctaactataagaaggaggttagtgttccccaaaagactccaattgatattgaa
gcaattttgagatctccaagtcctgagatagacataaaagactctcctggtttcagcttt
ttccgcagacatctgaggaatgcagaccgtctctcatgcaaaagacgattggaggaggat
atggatgcacatccagaaatggtcgcataa
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integrated database retrieval system
