Salvia hispanica (chia): 125189676
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Entry
125189676 CDS
T09851
Name
(RefSeq) PHD finger protein MALE STERILITY 1
KO
K26271
PHD finger protein MS1/MMD1
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shis03000
]
125189676
Transcription factors [BR:
shis03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
125189676
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GFIT
Motif
Pfam:
PHD
PHD_5
DUF7341
Motif
Other DBs
NCBI-GeneID:
125189676
NCBI-ProteinID:
XP_047942886
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All DBs
Position
5:23482699..23484685
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AA seq
595 aa
AA seq
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MSQLDLSRKRKRGDKVFKFKVFGARGYPAASNGSFLENIRALLEFGQVETNPASTWSFQL
ESRRHPLLLFVVEEPVDFSCTHCRYTGWGHHMICNKNYHFLLPSKSGSDEYAKTNAIELH
RETHSLHGVLHSNGFGHLLCINGGSGLPGYQIMEFWDRLCSGLGAREVSLRDSANKKGME
LRLLHSVAYGRPWFGQWDYTFKRGSYGVDKEMYQNAIKTIQNVPLTLIAHQFGFGSEIQV
IFCRYQQLSSHSLMTLGDVFHFMLELKFRVSEESSGYSAIMSDASCRWSPKRVEKAIHVV
VEALKRAEFQWVSRQHVRDVARAYIGDTGLLDFVLKSLGNHMVGKYLVRRCLNPVTKVLE
YCLEDVSTTFSKQEANLRPQQKISWAQLVKDLLCLYSNILGDHNPITRNGAFAAIHLASR
VILDAKHLAKEYRTPVEEGSKKKIYCRVNILNNADQEVAATPYHCVVVRSGATFDEVRRE
AERTFGETYVALRNMAAEAMRPQGTEAVVRAGSKVELVCRQGEGEVYQEGPVVNCVCGAR
DDDGERMVSCDLCRAWHHTSCVRIPDHHAVPDIFLCTGCEQDILRFRCYATSTPI
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagctcgacctgagccgcaagaggaagaggggcgacaaggtgttcaaattcaaa
gttttcggcgccagaggctacccggccgcctccaacggctccttcctcgaaaacatccga
gccctcctcgagttcggccaggtcgagaccaacccagcgtccacctggtccttccagctt
gagtcgcgccgccatcctctccttctctttgttgtcgaagagcccgtagacttctcctgc
acccactgccgctacacaggttggggccatcacatgatctgcaacaagaactaccatttc
ctattgccctctaaatccggctctgatgaatacgcaaagaccaacgccatcgagttgcat
agggagacccacagtctgcatggtgtcctccactccaacggattcggtcatctcctttgc
atcaacggtggatccggtctgcctggctaccagatcatggagttctgggaccggttatgc
tccggtttaggagctagggaggtgagtttgagagactcggcgaacaagaaagggatggag
ctgcgattgctccacagtgtcgcctacggaaggccttggttcgggcaatgggactacaca
tttaagcgcggaagctacggcgtcgataaagaaatgtaccaaaacgcaatcaaaaccatc
caaaacgttcccctaaccctaatcgctcatcaattcggattcgggagcgagattcaagtc
atattctgccgctaccagcagctgtcgagccattccctcatgacgttaggcgacgtgttc
catttcatgctggaactgaaattcagggtctccgaggagagcagcggctactcggccatc
atgtcggacgcgtcgtgccggtggtccccgaagcgcgtggagaaggcgatccacgtggtg
gtggaggccctgaagcgcgccgagttccagtgggtgtcgcgccagcacgtgcgggacgtg
gcccgcgcctacatcggcgacacgggcctcctcgacttcgtgctcaagtccctcgggaac
cacatggtggggaagtacctggtgaggaggtgtttaaaccccgtcaccaaagtgctggag
tattgtttggaggatgtttctacaacattctccaaacaagaagccaatttaaggccgcag
cagaagatctcttgggctcagctcgtcaaggacttgctctgcctgtactccaacattctt
ggcgatcacaatcccatcactaggaatggggcattcgccgccatccacttggcgtcgaga
gtcattctcgacgccaagcatcttgcgaaagagtaccggacgccggtggaggaaggaagc
aagaagaagatctactgcagggtgaatatccttaataatgcggatcaggaagtggcggcg
acgccgtaccactgcgtcgtggtgaggagcggcgcgacgttcgatgaggtgaggcgcgag
gcggagaggacgttcggggagacgtacgtggcgctgaggaacatggcggcggaggcgatg
aggccgcaagggacggaggcggtggtgagggcggggagtaaggtggagttggtgtgtagg
cagggggagggggaggtttaccaggaggggccggtggtgaactgcgtttgtggggcgagg
gatgatgatggggagaggatggtgtcgtgcgatctgtgccgagcgtggcaccacaccagc
tgcgtgcgcatccctgaccatcacgctgtgcccgacatatttctgtgcacgggatgcgaa
caggatatcctgcgcttccgctgctatgccacctccacgcctatctga
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