Salvia hispanica (chia): 125189734
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Entry
125189734 CDS
T09851
Name
(RefSeq) cell division control protein 48 homolog C-like
KO
K14571
ribosome biogenesis ATPase
Organism
shis
Salvia hispanica (chia)
Pathway
shis03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125189734
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shis03009
]
125189734
Ribosome biogenesis [BR:
shis03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
125189734
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Rad17
AAA_16
AAA_5
AAA_14
AAA_22
AAA_2
RuvB_N
RNA_helicase
AAA_33
AAA_18
DUF815
ABC_tran
DUF5557
AAA_7
AAA_28
DUF3931
TsaE
HTH_49
IstB_IS21
NACHT
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
125189734
NCBI-ProteinID:
XP_047942931
LinkDB
All DBs
Position
5:complement(26997213..27000987)
Genome browser
AA seq
488 aa
AA seq
DB search
MRAPSVVFIDEIGAMTSVKKRTLKEVEYRIVDQLMAFMDGRDRPTGPVNDDVSFESSNST
PGYVLVIGATNRPDALDTALRRLFDHEFALGVPDECERFDILSALTRNLKVEVGFDPRKL
ARSTMGYVAGDLVALAKRAGMLAVHSIMGNGNSEYLKEPRHMVEHEEYYTQPFYDEELEN
FSITMNHFVQAGKMVQPSAIMKDFFTTLHAKWDDVGGLEALKSEFERHVVKAIKYPRVYE
DIKTSVLSSFLLCGPSGCGKTLLVKAVAKEAGANFMHIKARDLLKFGNQCEMVVHNIFSY
ASTHVPCVLFFDELDLMASCDNVPRWPDFRQLISELSDTELTMEGVLVFGATNRPEIVSH
SSLIETQFDRLLYVPLPTPEERGAILKALTRGKPIDPDVDLMALGNDVACESFSGRDLFA
LVIEASKFAINRPALSVGNRMTIKDADFKSALAKVYPSLSATVLLLEVKNWELQSKKIVV
HSSSVMDW
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgagagcaccatctgttgtgttcattgatgaaattggtgcgatgacttctgtaaagaaa
aggacactcaaggaagtagagtatcgcatagtggatcagttgatggcttttatggatggg
cgagacagacctaccggaccagtaaatgacgatgttagttttgaaagttctaatagtaca
cctggctatgtgctggtgattggagccaccaacaggcctgatgctcttgacactgcctta
aggcgtttatttgatcatgaatttgctttaggtgttccagatgaatgtgaaaggtttgac
attctgtcagctctaacacgcaatcttaaggttgaagttggttttgatcccaggaaatta
gctaggtccactatgggctatgtagcaggagatttggtagctctagcaaaaagggctggt
atgcttgctgtacatagtatcatgggcaatggaaactcagagtatctcaaagaaccgagg
cacatggttgaacatgaagaatattacacgcagccattttatgatgaagaattggaaaac
tttagcataaccatgaatcactttgtgcaagctggaaagatggttcagccgtctgcaatt
atgaaagattttttcaccacactacatgcaaagtgggatgatgttggaggtcttgaagca
ttgaaatcggagtttgaacgtcatgtagttaaagcgattaagtatcctcgagtttatgag
gatataaagacgagtgtcctaagctcctttctcctttgtggtccttctggctgtggaaag
acattgcttgtcaaggctgtggctaaagaagcaggagcaaatttcatgcatatcaaggcc
cgtgatctattgaaatttggcaatcagtgcgaaatggtagtgcataacatattcagttat
gcaagcactcacgtcccatgtgtacttttctttgatgagctggacttgatggcctcatgt
gataatgtaccacgatggccggactttagacagctaatatcagagctgagtgatacagaa
ttaacaatggaaggtgttcttgtgtttggtgcgacaaacaggcctgaaatcgtgagtcat
tcttcactcatcgaaacacaatttgataggcttctgtatgttcctctccctactccagaa
gagcgaggtgcgatattgaaagctcttactcgaggcaagccaatagatcccgatgtggac
ctgatggccctaggaaacgacgtggcctgtgaaagttttagtggccgtgatctatttgct
ttggtaatagaagcttctaagttcgccattaatagaccagcattgtctgtcgggaaccgc
atgacaatcaaagatgcagatttcaagagtgcgttggcaaaagtctacccttctctctca
gccacggtgctgctactggaagtcaagaactgggagcttcagtctaagaagattgttgtt
catagcagttctgtgatggactggtag
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