Salvia hispanica (chia): 125189738
Help
Entry
125189738 CDS
T09851
Name
(RefSeq) cell division control protein 48 homolog C-like
KO
K14571
ribosome biogenesis ATPase
Organism
shis
Salvia hispanica (chia)
Pathway
shis03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125189738
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shis03009
]
125189738
Ribosome biogenesis [BR:
shis03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
125189738
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_14
AAA_5
RuvB_N
AAA_22
AAA_2
IstB_IS21
NPHP3_N
HTH_49
AAA_16
nSTAND3
RNA_helicase
Mg_chelatase
Motif
Other DBs
NCBI-GeneID:
125189738
NCBI-ProteinID:
XP_047942936
LinkDB
All DBs
Position
5:27223649..27231254
Genome browser
AA seq
618 aa
AA seq
DB search
MTREKGSAAVALRRHIESVSNGKGNLTDEQIVNLLCSLHRLTYSRLDRNLLTERVAKITQ
LQRRRAGVFSQDPAPFSARRQKINEPAPFSAKRKKINEFSASPLEKGDCSNNPKTIGNLG
RSDELGHGRGEMNRNGRRSESESESEKHSRPSFRDLLGITSVIDELKQEVVRPLHQLKLL
RHLGVKPTSRILLHGPPKCGKTMLARAVANEARLPLFEISVARLMRGDLGAAEEKIRRLF
LTAYMRAPSVVFIDEIDAMTSVKKRTLKEVEYRIVDQLMAFMDGRDRPTGPVNDDVSFES
SNSTPGYVLVIGATNRPDALDTALRRLFDREFALGVPDECERFDILSALTRNLKVEVGFD
PRKLARSTMGYVAGDLVALAKKAGMLAVHSIMGKRNTEYLKELRHMVEHGECYMQPFYDE
ELENLSITMNHFVQAGKMVQLSAIMKDFFTTLHAKWDDVGGLEALKSEFERHVVKAIKYP
RVYELISELTMEGVLVFGATNRLEIVSHSSLIKTQFDRLLYVPLPTPEERGAILKALTRC
KPIDPDVDLMALGNDVACENFSGRDLFTLVTEASKFAINRPALSVGNRMTIKYADFESAL
AEVSPSLSATVLLLEVKK
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgacgagagaaaaaggcagcgccgctgtggctctccgccgccacatcgagtccgtctcc
aacggcaaaggaaacctcaccgacgagcaaatagtaaacctactctgctcgttacaccgc
ctcacctacagccgcctcgaccgcaacctcctaactgaacgcgttgccaaaatcacccag
ctccagcgccggagagcaggcgtcttttcccaagatcccgctccgttctcagccagacgc
caaaaaatcaatgagcccgctccgttctcagcgaaacggaaaaaaatcaatgagttctcc
gccagtccattggaaaagggcgattgtagtaataatccgaaaacgattgggaatttaggg
cggagtgatgaattaggccatggcaggggagagatgaacaggaatgggagaaggagtgag
agtgagagtgagagtgagaaacatagtcggccaagttttagggatttattgggaatcact
agtgtgattgacgaattgaagcaggaggtggttcggccactgcatcagctgaagctgctg
cgccacctcggagtcaagcctacgtctcgaattctgctgcatgggccacccaaatgtggg
aagaccatgttggcccgagctgttgccaatgaggccagattgccattgttcgaaatctct
gttgctcgattgatgcgtggagatttaggtgcagcagaagaaaagatccgaagattgttc
ttaacagcatacatgagagcaccatctgttgtgttcattgatgaaattgatgcgatgact
tcagtaaagaaaaggacactcaaggaagtagagtatcgcatagtggatcagttgatggct
tttatggatgggcgagacagacctaccggaccagtaaatgacgatgttagttttgaaagt
tctaatagtacacctggctatgtgctggtgattggagccaccaataggcctgatgctctt
gacactgccttaaggcgtttatttgatcgtgaatttgctttaggtgttccagatgaatgt
gaaaggtttgacattttgtcagctctaacgcgtaatcttaaggttgaagttggttttgat
cccaggaaattagctaggtccactatgggttatgtagcaggagatttggtagctctagca
aaaaaggctggtatgcttgctgtacatagtatcatgggcaagagaaacacagagtatctc
aaagaactgaggcacatggttgaacatggagaatgttacatgcagccattttacgatgaa
gaattggagaaccttagcataaccatgaatcactttgtgcaagctggaaagatggttcag
ctgtctgcaattatgaaagattttttcaccacactacatgcaaagtgggatgatgttgga
ggtcttgaagcattgaaatcggagtttgaacgccatgtagttaaagcgataaagtatcct
cgagtttatgagctaatatcagaattaacgatggaaggtgttcttgtgtttggtgcaaca
aacaggcttgaaattgtgagtcattcttcactcatcaaaacacaatttgataggcttctg
tatgttcctctccctactccagaagagcgaggtgcgatattgaaagctcttactcgatgc
aagccaatagatcccgatgtggacctgatggccctaggaaacgacgtggcctgtgaaaat
tttagtggccgtgatctatttactttggtaacagaagcttctaagttcgccattaataga
ccagcattgtctgttgggaaccgcatgacaatcaaatatgcagatttcgagagtgcgttg
gcggaagtctccccttctctctcagccacggtgctgctactggaagtcaagaagtag
DBGET
integrated database retrieval system
