Salvia hispanica (chia): 125190116
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Entry
125190116 CDS
T09851
Name
(RefSeq) uncharacterized protein LOC125190116
KO
K03539
ribonuclease P/MRP protein subunit RPP1 [EC:
3.1.26.5
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125190116
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shis03009
]
125190116
03016 Transfer RNA biogenesis [BR:
shis03016
]
125190116
03029 Mitochondrial biogenesis [BR:
shis03029
]
125190116
Enzymes [BR:
shis01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
125190116
Ribosome biogenesis [BR:
shis03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
125190116
Transfer RNA biogenesis [BR:
shis03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
125190116
Mitochondrial biogenesis [BR:
shis03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
125190116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_P_p30
Motif
Other DBs
NCBI-GeneID:
125190116
NCBI-ProteinID:
XP_047943273
LinkDB
All DBs
Position
5:complement(24234647..24241744)
Genome browser
AA seq
698 aa
AA seq
DB search
MGFFDLSIPYRESDRHAVDKPSLRGRRLKLALKAMELGYTGVAYNRTLTGVMSESDRCSI
LLFPISTLTPSSSSFFASVKFHRDILHVAGAAPFRQYTRLTLVVTNSAQALALNSGNPVL
RSYDIVSVRPTRQDAFDQACQNSEVDMISIDFSKMDSFSFRLRQPMIKAAIKRGLYFEIT
YSDLIGDPESKRKMISNCKLLVDWTRGKNLIICSDASSASEIRGPQDVANLFFLLGLSRE
RAKAAISSNCRSLLANAIRKKHFYKEAVKVEEIPSGGQSITSKSVFDDWLKWDPISSGQG
DVLLEDMEKSFSISKTVKENVKTINFTSNLNGLPAHGFQIKDLVFANKASLEPCDADKRA
LLVVETEGGASDEKQVANTLRKQHHSLLKNEDGPGNLNNEPEGVVDLPEGQTSPSGATNI
YANSDCQDSEVQLGYVPDAKLALPPLLGRDQVSFDVAQGEYQISGSGDSSQLSLPTFSVN
SADSEEIIKTSNDLEQNTVASETQLKDPPSPVQQGNFLHGGGQVSITKSNTLAIDNHVTV
ELSNPLNKSSSSIFPLDLGTENLLEKGACANEGNRMDEIHNKNAIENRQEYPLVSPHISY
EDGYGEGGQCSKITDSSIKFGVGSPLEGSSNMITKFDEPTNDDVMVELKQIDSLPDCQGF
SKSRSGINKRKGKSSHQPFLFPFKRYMKSKPSKKKPRK
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgggattcttcgacttgagcataccctaccgggaatccgaccgccatgccgtcgacaaa
ccctccctgagaggccgccgcctgaagctcgccctgaaagccatggaactcggctacacc
ggcgtcgcctacaatcgcaccctcacaggcgtcatgtccgaatccgaccgctgctccatc
cttctcttccccatctccacactcaccccctcctcctcttcgttctttgcctccgtcaag
ttccaccgcgacattctacacgtcgccggtgcagcccccttccgccagtacacccgcctc
accctcgtcgtcactaattccgcccaggctttggctcttaattccggtaaccctgtgctg
cgaagctatgacatcgtctccgttaggcctactagacaagatgcatttgatcaggcttgt
caaaattcggaggttgatatgatctctattgatttctcgaagatggactcattcagcttc
aggctaaggcagccgatgatcaaagctgcaattaagcgagggttgtactttgagatcaca
tactctgatctgattggtgatccagaatcaaaacgaaaaatgatatccaattgcaagctt
cttgttgattggactcgagggaaaaatttaattatatgtagtgatgcctcttctgcctct
gaaattagagggcctcaagatgtagcaaatttgttctttttgctgggactctctagagaa
cgtgctaaagcagctatctcctcaaactgtagatctctcctagctaatgcaataaggaaa
aaacatttttacaaagaggctgttaaagttgaagagataccatctggtggacaatccatt
acatcaaaatctgtgtttgatgattggctcaaatgggatcctatttctagtggccagggt
gatgtgctattggaagacatggagaagtctttttctatttcgaaaactgtaaaagaaaat
gtgaaaaccatcaacttcacctcaaatttgaatggcctgcctgcacatggtttccagatc
aaagatctggtatttgcgaataaggcatctttggagccgtgtgatgcggataaacgtgct
cttcttgtcgttgagactgaggggggtgcttcagatgaaaagcaggttgctaacactttg
cgcaaacaacaccacagcctgcttaaaaatgaagacggtcctggtaatttgaataatgaa
ccagagggggttgttgatctgcctgaaggtcaaacgtcaccatctggtgccactaatatt
tatgctaactctgattgtcaagattcagaagttcaattgggttatgttccggatgcaaaa
cttgcgcttccacctcttctaggacgtgatcaagtttcctttgatgttgcacagggagaa
tatcagatttcaggttcgggagattcgtcacaattgtctttgcccactttcagtgttaat
tccgcagattctgaagaaattataaagacttcaaatgacttggaacaaaatactgttgca
tctgaaacccaattaaaagatcccccatcccctgttcagcaaggaaactttttacatggt
ggtggacaagttagtatcacaaagagcaatacgttagctattgacaaccatgttactgta
gaactttccaatcccttgaataaatctagttcctctatctttccattagatcttggtacg
gaaaatctattagaaaagggtgcatgtgcaaatgaaggtaacagaatggatgaaattcac
aacaaaaatgccattgaaaataggcaagagtatcccttggtatcacctcacatctcctat
gaagatggttatggtgaaggaggacagtgtagtaaaattactgatagttctattaagttt
ggtgttgggtcgcctctagaggggtcttcaaatatgataacaaaatttgatgagccaaca
aatgatgacgtgatggtcgagttgaagcagatagattcactccctgattgtcaaggcttt
tctaaatctcgttcaggaataaataaaagaaaaggaaagtcgtctcatcaacctttcttg
tttccattcaagcgttatatgaagtccaagccttccaagaagaagccccgaaagtaa
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