Salvia hispanica (chia): 125190236
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Entry
125190236 CDS
T09851
Name
(RefSeq) truncated transcription factor CAULIFLOWER A-like
KO
K09264
MADS-box transcription factor, plant
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shis03000
]
125190236
Transcription factors [BR:
shis03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, Homeotic genes
125190236
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Gene cluster
GFIT
Motif
Pfam:
K-box
SRF-TF
Motif
Other DBs
NCBI-GeneID:
125190236
NCBI-ProteinID:
XP_047943441
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Position
5:complement(3650912..3656110)
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AA seq
247 aa
AA seq
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MGRGRVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDADVGLIVFSTKGKLFEYATD
SCMERILERYERYSYAERQLKEPDPDSPASWTLEHAKLKARMEVLQRNQRHYMGEDVDTL
SMKELQNLEHQLDDSLKHIRRRKNQLMNESISELQKKDKALQEQNNILAKKIKEREKETV
AAAMEQQQNHNLNSSGFGHPHHMGMGSFNNSNEMYQVEGEGAVGGVSVTQHQNQFSNPVM
PPWMLHS
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atggggagagggagagtgcaactgaagagaatagagaacaaaattaatcgacaggtgacc
ttctcgaagcggagatcggggcttctcaaaaaggcaaatgagatctctgtcctctgcgac
gccgatgttggcttaatcgtcttctccactaagggaaagctcttcgaatatgctaccgat
tcatgtatggaaaggatccttgaacgatatgaaagatattcatatgctgaaaggcagcta
aaagagcctgaccctgattcaccggcaagctggactttggagcatgctaagctcaaggct
agaatggaggttctgcagagaaaccagaggcattatatgggagaagatgtggatactctt
agcatgaaagagctgcaaaacttggaacatcaacttgatgactctcttaaacacattcgc
aggcgcaagaaccaactcatgaatgagtccatttcagagctccaaaaaaaggacaaggca
ttgcaagagcaaaacaacatcctagcgaagaagatcaaggagagggaaaaagagacggtg
gcggcggcaatggagcaacaacaaaaccataacttgaactcttctggtttcggtcaccca
catcatatggggatgggatctttcaacaacagcaatgagatgtatcaagttgaaggagaa
ggtgcggtagggggcgtgagtgtaacacaacaccaaaatcaattttcgaatccggtaatg
ccgccgtggatgctacactcatga
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