Salvia hispanica (chia): 125190424
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Entry
125190424 CDS
T09851
Name
(RefSeq) cell division cycle 20.2, cofactor of APC complex-like
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
shis
Salvia hispanica (chia)
Pathway
shis04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125190424
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shis04121
]
125190424
03036 Chromosome and associated proteins [BR:
shis03036
]
125190424
Ubiquitin system [BR:
shis04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
125190424
Chromosome and associated proteins [BR:
shis03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
125190424
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
ANAPC4_WD40
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
EIF3I
WD40_MABP1-WDR62_2nd
eIF2A
Beta-prop_HPS5
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
Beta-prop_Vps41
Beta-prop_EIPR1
CFAP43_N
DUF2509
Beta-prop_SCAP
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
125190424
NCBI-ProteinID:
XP_047943697
LinkDB
All DBs
Position
5:complement(30304596..30306666)
Genome browser
AA seq
451 aa
AA seq
DB search
MDNETDWRLASDWYSPTRLHDSPVKYDFPGDRFIPNRSLMDLDQAHGTLTNTTVARPTHT
KSSIEYRKSLSNLTLNAEGRPFQMLVFRGSPKSSRKLSPMIDETRCCNNETLTCRPLRRF
PKGEARILDAPRISHDYYLNVIDWGKTNLLAAALDRKLYLWNANTCKVELVSEASEGDYL
ASVNWSENGEVVAAGYSCSKIHLYDAESLHLVRLLEGQRGRVGSIAWNGHTLTCGSSSGA
IINHDVRVRNSQVCRVKVHKGEVSGLKWSAAGSMLASGANDTRVYLWDACKMSANHHVYR
FDHHCAAVKALAWCPHDYNVLASGGGLDDGNIKLWNTQKGTCTSSTETKSQICGLQWNRH
HKELLSGHGYGYECQNQLCLWKYPSMSRIGESANATSRVLHLTQSPDGLTVASAGEDEAL
RFWNVFGPAAPGNSRMSYLESLLSLKTSAIR
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggataatgagactgattggagactggcctccgattggtactctccaactcgcctccac
gacagccccgtcaaatatgattttccgggcgataggtttatcccaaatcggagtcttatg
gatctcgatcaagcccacggtacattgaccaacaccactgttgcacgacccacacatacc
aaatctagtattgaatataggaaatctttgagcaatctgaccttgaatgctgaaggtagg
ccatttcaaatgcttgttttcaggggcagtcccaaatcaagtagaaaactgagccctatg
attgatgagacgcgatgttgtaacaacgagacccttacttgtagaccgttgcgaagattc
cccaagggtgaagctcgtatcctggatgcgccaagaatcagccacgactattatctcaac
gttattgattgggggaagacgaacctgctagcagctgctcttgacagaaaattatacttg
tggaatgcaaacacttgtaaagttgaactagtgtcagaagcgagcgaaggcgactatctt
gctagcgtaaactggtctgaaaatggagaagttgtagcagcggggtatagttgctctaaa
attcatctctatgatgctgagtcgctccatctagtgaggttgttagagggtcagcgtgga
cgtgtgggatctatagcgtggaatggtcacacactaacttgtggaagctctagtggagct
atcatcaaccatgatgtgagagtgaggaacagtcaagtgtgccgtgtgaaagtgcacaag
ggtgaagtctctggtttgaagtggtcggctgcagggagcatgctagccagtggtgcaaat
gatactagagtctacttgtgggacgcatgcaagatgagcgcaaaccatcacgtttacaga
ttcgatcatcattgtgcagcggttaaagctctggcgtggtgccctcacgactataacgtg
ctggcatccggtggtggcttggacgatggcaatataaagctatggaacactcaaaaaggg
acctgcacctctagcacagaaactaagtcacagatatgtgggctacaatggaacaggcat
cacaaagagttattaagcgggcatggctacggctacgaatgccaaaaccagttatgcttg
tggaagtacccttccatgtcccgaataggagagtctgccaacgcgacgtctcgggttctt
catctaactcagagccctgatggtctgactgtcgcctcagccggagaagacgaggccctt
cgattctggaatgtatttggtccagcagcccctggcaattcaaggatgtcctatttggag
agccttctctctctcaagacatcagccataaggtga
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