Salvia hispanica (chia): 125190666
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Entry
125190666 CDS
T09851
Name
(RefSeq) heparanase-like protein 3 isoform X1
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis00531
Glycosaminoglycan degradation
shis01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
125190666
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
shis00536
]
125190666
Enzymes [BR:
shis01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
125190666
Glycosaminoglycan binding proteins [BR:
shis00536
]
Heparan sulfate / Heparin
Enzymes
125190666
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
125190666
NCBI-ProteinID:
XP_047943973
LinkDB
All DBs
Position
5:complement(5364241..5367216)
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AA seq
535 aa
AA seq
DB search
MRFLDMQMGCWVLVVSVVCLSFVQATGSIEGSVFIDGSVPIAKTDDDFICATLDWWPPEK
CDYGTCSWGHASLLNLDLKNTVFLNAVKAFSPLKIRLGGTLQDKVVYETEDDSHPCIPFA
KNSSIMFSFTQGCLPLSRWDELNSFFNESGALVVFGLNALRGKSIQSGTAVGPWDSTNAA
SLIRYTVKKGYKIYGWELGNELSGSGIGVGIAADQYASDTIALHDLVKEVYKEADVRPQI
IAPGGFFDAGWFQQFLAKTVGSLDVITHHIYNLGPGSDEHVIDRILNPSVLESGGDVFRN
LHNVIRTSPNSAAAWVGEAGGAYNSGRDGVTNAFVFSFWYLDQLGQASTHDTKTYCRQTL
IGGNYGLLNTTTFIPNPDYYSALLWHRLMGRNVLSTSFNGNKTIRAYAHCTKHSKGVTLL
LINIDGNTTLRAKVDFNGTLKHNHHKHRHHRSRGNLLRHRKQVSEAVREEYHLTPMDGNI
RSRTVLLNGKALTVDSSGIIPSLQPVRVNSSELITVAPYSIVFVSMPNVSISACM
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgcgatttttggatatgcaaatggggtgttgggtgctggtggtgtctgtggtgtgcttg
agctttgtgcaggctactgggagcattgaaggtagtgtttttattgatgggagtgtgccc
attgcaaagacagatgatgatttcatttgtgcaacattggattggtggccacctgagaag
tgtgattatgggacttgtagctggggacatgcttctttgctcaacttggatctcaagaac
acagtcttcctaaatgctgttaaagcattttcaccattgaagatcagattgggtggcacc
ttgcaagacaaagttgtctacgagacagaagatgattcacatccctgcattccgtttgcc
aagaattcctccattatgttcagtttcacgcaaggctgcctgccattgtctagatgggat
gagctgaactccttcttcaatgaatcaggggctcttgttgtttttggactgaatgctctt
cgcggaaagtctatacaatctggtactgctgtaggcccgtgggattccacgaatgctgca
tctctcattcgttatactgtgaaaaagggttacaagatttatggttgggaacttgggaat
gaactgagtggaagtgggatcggggttggaattgctgcggatcagtatgcatccgacaca
attgctctacatgacttagtcaaggaggtgtacaaggaggccgatgtaagaccacagatc
atcgcgcctggggggttcttcgatgctggctggttccagcagtttctggctaaaacagtt
ggatcattggatgtgatcacacaccacatctataaccttggccctggaagtgatgagcat
gttatagataggattttaaatccatctgttctggagagtggaggtgacgtgttcaggaac
ctccataatgtcatcaggacatcgccaaactcagctgcagcctgggttggtgaggctgga
ggggcttataacagtggccgcgatggagtcacaaatgctttcgtgtttagtttctggtac
ttggatcaactaggtcaagcttcgactcacgacacgaaaacatactgcaggcagacgttg
attgggggtaactatggcttgctcaacaccaccacattcataccaaatccagactactat
agcgctcttctctggcaccggttgatggggaggaacgtcctgtcaacctccttcaacggg
aacaagacaatccgagcatacgcacattgtacaaagcattctaaaggggtcacactgtta
ctcattaatatcgatggaaacacgaccttgagggcgaaagtcgacttcaatgggacgttg
aagcacaaccaccacaagcataggcatcatagatcaagagggaatctgctgcgtcaccgg
aaacaggtgtctgaagctgtgagagaagagtaccatctgactccaatggatggcaacata
cggagccgtacagttctgctgaacgggaaggcgctgactgtcgactcatcggggattata
ccttcccttcaacctgttagggtgaattcatcggagttgataacagtggctccttactcc
attgtgtttgttagcatgccaaatgtttctatctcagcatgcatgtag
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