Salvia hispanica (chia): 125190685
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Entry
125190685 CDS
T09851
Name
(RefSeq) eukaryotic initiation factor 4A-2-like
KO
K03257
translation initiation factor 4A
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shis03019
]
125190685
03012 Translation factors [BR:
shis03012
]
125190685
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shis04147
]
125190685
Messenger RNA biogenesis [BR:
shis03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
125190685
mRNA cycle factors
Stress granule specific factors
125190685
Translation factors [BR:
shis03012
]
Eukaryotic type
Initiation factors
eIF-4
125190685
Exosome [BR:
shis04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125190685
Exosomal proteins of bladder cancer cells
125190685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
125190685
NCBI-ProteinID:
XP_047943997
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Position
5:complement(41064050..41066707)
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AA seq
414 aa
AA seq
DB search
MAGLAPEGSQFDARQFDTKMNELLGAEGGEEFFTSYDEVYDSFDAMGLQENLLRGIYAYG
FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYTLVECQALVLAPTRE
LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLR
PDHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPV
RILVKRDELTLEGIKQFYVNVDKEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM
RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQ
PENYLHRIGRSGRFGRKGVAINFVTKDDERMLFDIQKFYNVTVEELPANVADLL
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggctggattagcacccgaaggctctcaatttgatgctcgccagtttgatacgaagatg
aatgagttacttggagctgaaggtggcgaggaattctttacgagctatgatgaggtctat
gacagttttgatgccatgggattacaggaaaatcttctgagaggcatctatgcctacggt
tttgagaagccgtctgcaattcagcagagaggtattgttcccttctgcaagggacttgat
gtgattcaacaagcccaatctggaactgggaaaactgccaccttctgctctggcatcctt
cagcagctagactatacccttgttgaatgccaggctcttgttctggcacctacccgtgag
cttgcccagcaaattgaaaaggtgatgagagctttgggtgactatcttggtgtcaaagtt
catgcttgcgtgggtggtaccagtgtgcgtgaagatcagcgcattctatccagtggagtt
catgttgtggttggtactcccggacgtgtgtttgacatgttgagaaggcaatctctgcgc
ccagatcacatcaaaatgtttgtgttggatgaggctgatgaaatgctttccagagggttc
aaggatcagatctatgacatcttccagttgctgcctcccaagattcaagttggtgtgttc
tctgctaccatgccaccagaggctcttgagatcacaaggaaattcatgaacaagccggtt
cgtatcctcgtgaagcgtgatgagctaactctagagggtatcaagcagttctacgttaat
gtggacaaggaagactggaagcttgagaccctctgcgatctctacgagaccctggccatc
acccaaagtgtcatcttcgtcaacaccaggcgcaaggtcgactggctgaccgacaagatg
cgcagccgtgaccacaccgtctctgccacccacggtgacatggaccagaacacaagagac
atcatcatgcgggagttcagatccggctcttcccgtgtcctcatcaccactgatctcctt
gcccgtggtatcgatgtgcagcaggtctccctcgtcatcaactatgacctgccgacacag
ccggagaactacctccaccgtatcggacgaagtgggcggttcgggaggaagggtgttgcc
ataaacttcgtgaccaaggatgatgagcgtatgctcttcgacattcaaaagttctacaat
gtgacggtggaggagctcccagccaacgttgctgacctcctctag
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