Salvia hispanica (chia): 125190743
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Entry
125190743 CDS
T09851
Name
(RefSeq) ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
shis03110
]
125190743
Chaperones and folding catalysts [BR:
shis03110
]
Heat shock proteins
HSP100
125190743
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_16
Sigma54_activat
AAA_22
UVR
nSTAND3
TniB
AAA_14
AAA_28
AAA_18
NACHT
Mg_chelatase
Zeta_toxin
AAA_25
IstB_IS21
Torsin
DNA_pol3_delta2
SRP54_N
MazE_antitoxin
AAA_23
Motif
Other DBs
NCBI-GeneID:
125190743
NCBI-ProteinID:
XP_047944080
LinkDB
All DBs
Position
5:complement(7540724..7545879)
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AA seq
925 aa
AA seq
DB search
MARVLVQSTNLPSSVGFVNNGQFEGSSKNKKASTMLCSTKSSHVTVRSYSGLRGANALDM
LVRRSGQTLQSKVASATFGKRGKKQRMGPRAMFERFTEKAIKVIMLAQEEARRLGHNFVG
TEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLE
LSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESAEAV
GAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQDQIERVTQILGRRTKNNPCLI
GEPGVGKTAIAEGLAQRIATGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEE
IKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKD
PALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDESLVAAAQLSYQYISDRFL
PDKAIDLVDEAGSRVRLRHAQLPEEARELERELRQITKEKNEAVRGQDFEKAGELRDREM
DLKAQISALVDKNKEMSKAESEAGDGGPVVTEVDIQHIVSSWTGIPVEKVSTDESDRLLK
MEETLHTRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAY
YFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEK
AHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEK
DSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFERLKTKD
IELQVTERFRERVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDS
DGNVIVLNGSSGTPPEPAAPEPVVV
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtgttttagttcaatcgaccaatttgccttcttcagttggttttgtaaataat
ggccagtttgagggatcgagcaaaaacaaaaaggcatccacaatgctctgctctacaaag
tcgtctcatgtgacagtgaggagttactcaggactccgaggagctaatgccttggacatg
ttggtgaggagaagtggccagacactccaatcaaaggttgcgtcagccacctttggcaag
cgagggaagaaacaacgaatggggccacgagcaatgtttgagcgctttacagaaaaagct
attaaagtcattatgcttgcacaggaagaggcaagacggcttggccataactttgttgga
accgaacagatcttgcttgggcttattggtgagggcactggtattgctgctaaggtcctt
aagtccatggggataaatctcaaggatgcacgtgtagaggttgagaaaatcattggacga
ggtagtgggtttgtggctgtggagatcccttttacgccccgtgcaaagcgcgttttagaa
ctctctttagaggaagctcgtcagctcggtcacaattacattggctcggagcacttgttg
ttgggattgctccgtgagggtgaaggtgtggcagctcgtgtccttgagaatttaggtgct
gaccccagcaacattagaactcaggttattagaatggtgggtgaaagtgctgaggctgtt
ggagctggtgttggaggtggcagctctggcaacaagatgcccacgctagaggagtatggt
accaatttgaccaagctagcagaggagggtaagcttgacccagttgtcggaaggcaggat
caaattgagcgtgtgactcaaattctgggacgtcgcactaaaaataacccgtgtctcatt
ggagaaccaggagttggaaaaacagccattgctgagggcctcgctcagagaattgccact
ggggatgttccagaaaccattgaggggaaaaaggttatcactctagatatggggcttctt
gttgctgggacgaagtatcgtggtgaatttgaagaaagattgaagaagcttatggaggaa
attaaacaaagtgatgaaattattctcttcatcgatgaggtgcacacattgattggagca
ggagctgcagagggggcaattgatgccgcaaacatattgaagcctgctttggctcgtggt
gaattacagtgtataggtgctactacacttgatgagtaccgaaaacacatcgagaaggat
cctgcacttgaaaggaggtttcaacctgtcaaggtccctgaaccaacagtggatgaaacc
attcagattcttaaaggacttcgtgagcgctatgagattcaccacaagcttcgatacact
gatgaatctttagttgctgcagcacaattgtcatatcagtatatcagtgatcgctttttg
cctgacaaggcaattgacttggtcgatgaagctggctcacgggtccgacttcgtcatgca
cagctacctgaggaagctagagagcttgagagagaactcaggcagataacgaaggagaag
aacgaggctgtccgaggtcaagactttgagaaggctggagagctacgcgatagagaaatg
gatcttaaggcacagatatctgctctcgtagacaaaaacaaggagatgtcaaaggcagag
agtgaggctggtgatggaggtccagtagtcacagaggttgacattcaacacattgtttct
tcttggactggcatccctgtagagaaggtgtccactgacgaatccgaccgactcctcaag
atggaggagacccttcacacaagggtcattgggcaagacgaagctgtcaaagccattagt
cgtgccattcgccgggcccgtgttggtctcaagaatccgaaccgccctatcgctagcttc
atcttctctggtccaactggtgtggggaaatcagaattggctaaagcactggctgcatac
tactttggttctgaagaggccatgatccggctcgatatgagtgagttcatggagagacac
actgtatcgaagctcattggttcgcctcctggttatgttggttacactgaaggtgggcag
ctaacagaggctgttcgacgccgcccatacaccgttgtgctctttgatgagattgagaag
gctcatcctgatgtattcaacatgatgcttcaaattcttgaagatggaaggttgactgac
agcaaaggtagaaccgtcgacttcaaaaacacgctgctcatcatgacatcgaacgttgga
agcagtgtgatcgagaagggaggccgtcgtataggttttgatctggactacgatgagaag
gacagcagttacaaccgtatcaagagcttggtaactgaagagctgaaacagtacttccgg
cccgagttcttgaacagattggacgagatgattgtattccggcagctcaccaaactcgag
gtgaaggagatcgctgatataatgctcaaggaagtcttcgagaggctcaaaaccaaggat
atcgagcttcaggtgacagaaagattcagagaaagggtggtagacgaagggtacaaccca
agctacggagctaggcctctccggagagccatcatgagactcttggaggatagcatggcg
gagaagatgctcgcgcgcgagatcaaggaaggcgattccgttattgtcgatgtggattcc
gatgggaacgtgatcgtcctcaatgggagcagcggcacccctcctgagccggcagcacct
gagcctgtggtagtgtag
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