Salvia hispanica (chia): 125190750
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Entry
125190750 CDS
T09851
Name
(RefSeq) ATP-dependent DNA helicase Q-like 3 isoform X1
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis03440
Homologous recombination
shis03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
125190750
03460 Fanconi anemia pathway
125190750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shis03032
]
125190750
03400 DNA repair and recombination proteins [BR:
shis03400
]
125190750
Enzymes [BR:
shis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
125190750
DNA replication proteins [BR:
shis03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
125190750
DNA repair and recombination proteins [BR:
shis03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
125190750
Bloom's syndrome complex (BTR)
125190750
FA (Fanconi anemia) pathway
125190750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
Ribonuclease_P
Motif
Other DBs
NCBI-GeneID:
125190750
NCBI-ProteinID:
XP_047944089
LinkDB
All DBs
Position
5:complement(14176467..14184155)
Genome browser
AA seq
725 aa
AA seq
DB search
MSKSALPLQCVRGSEKQVIKKEALVKLLRWHFGHSDFRGNQLEAIQAVLSGRDCFCLMPT
GGGKSLCYQIPALAKPGIVLVVSPLIALMENQVMALKEKGVAVEYLSSTQTVKVKNKIYE
NLESGKPSLQLLYVTPELIATSGFMSKLMKIHGRGLLNLIAIDEAHCVSTWGHDFRPSYR
KLSSLRNNLPGIPVLALTATAVPKVQEDVIKSLSLQKPLVLKSSFNRPNIYYEVRYKDLM
DDPYSDICNYLKSCGNVCAIVYCLERTACDDLALHLSAQGIPCSAYHAGLNSNVRSSVLD
DWISSRTQVVVATVAFGMGIDRKDVRVVCHFNIPKSMEAFYQESGRAGRDQLPSRSLLYF
GVDDRRKMEFILSKAANKKSHSSSMDEGSTKNSLAEFQKMIEYCEEAGCRRKKILESFGE
EQVTASLCGKTCDSCKHPDMVSKYLEELTSTAAFQYKRGSSRIYITSASETYGDEQLSEF
WNRNDEASGSEEEDISDSDDATEIAKSVANLGKSSKWKLDERLESLERAEENYYRNKDNQ
DKQANKIDKKFISATLRNSGKQRLLTAMKQNQHLSSTLQMDFVTSAETLEIECYRKYGRS
GKSIYLSQMASTARWLSAAVPDELTQRLGTTPSMSTEADKPEADRSLSPSVPFIAAITPV
HEENGSGSGATIESNSAVLEHTLAPPILSFSEFINRRKVMDKQVSTSKRESKDGGSQGME
KKAKC
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaatcagcattgcccctgcaatgcgtgcgtgggtcggagaagcaggtgatcaag
aaggaagctttggtgaagcttctgcggtggcattttggtcattctgatttccgagggaat
cagttggaagccattcaagctgttctatcaggtagagattgtttttgtctgatgccgact
ggtggaggaaagtcactttgttatcagatccctgcccttgcaaagccagggattgtgctc
gttgttagtcctttgatagcccttatggagaatcaagtaatggctctgaaagaaaaaggg
gttgctgttgaatatctctcttcaactcagactgtcaaagtcaagaataagatctatgaa
aaccttgaatctggaaagccatctttgcaactattgtatgttacaccagaactgattgcc
acatcaggatttatgtcaaagctgatgaagattcatggcagaggattgctaaatcttata
gcaattgatgaggcacattgcgtatcaacatggggccatgatttcaggccaagctacaga
aagctttcttctctgaggaataatttgccaggcataccagttctagcattgacagcaaca
gctgttcccaaggttcaggaggacgtgataaagtccttgtctttgcaaaaacctcttgtt
ctgaagtcatcattcaatcgtccaaatatttattatgaagttcgctataaagatctgatg
gatgatccatattctgatatttgcaattatctgaaatcatgtggaaatgtatgtgcaatt
gtttattgtcttgagcgcacagcttgtgatgatctggcactccacctatctgcacaagga
attccttgttctgcatatcacgcaggattgaacagtaatgtccggagttctgtcttggat
gactggatctcctctagaacacaagtagttgtggctactgtagcttttgggatgggtatt
gataggaaggatgtcagagttgtttgccattttaatatccccaagtctatggaagcattc
taccaagagtcaggtcgagctggtcgtgaccaactgccttctcgaagtctgttgtatttt
ggagttgatgatcgtagaaaaatggaattcatcctgagtaaggctgcaaacaagaaatca
cattcttcaagcatggatgagggttcaacaaagaactccttagctgagttccagaaaatg
attgaatactgtgaggaggcaggctgccggagaaaaaagatccttgaaagttttggggaa
gagcaggtaacggcatcattatgtgggaaaacttgtgactcatgcaaacaccctgatatg
gtttcaaagtatttggaggagcttacaagtactgctgcttttcaatataaaagggggtca
tcaagaatatacataaccagtgcttcagagacctatggtgatgaacaattgtcagaattc
tggaatcgaaatgatgaagctagtggatctgaggaagaagatatttctgattctgatgat
gccacagaaattgcaaaaagtgtagcaaatttaggaaaatcatccaaatggaaactagac
gaaagattggagtcattagagcgtgcggaagagaattattatcggaataaagataaccaa
gacaaacaggccaataagatcgacaagaaattcatatccgcgacgcttagaaattctgga
aagcagaggttactaactgcaatgaagcaaaatcagcatctttccagcactttacagatg
gactttgtgacatctgcggagacacttgagattgaatgttaccggaaatacgggagaagt
gggaagtcaatttatttatcccagatggcaagtaccgcaagatggctgtcagcagcggtc
cctgatgaactaacacaaagacttggtaccactcctagcatgtcaacagaggcagataaa
cccgaagcagatcgctctttatcaccatcagtgccattcattgcagcaatcacaccagtc
catgaagagaatgggagtggcagtggtgctaccattgaatcaaactctgctgtcctcgag
catacattggcaccaccaattctgtcattctcagaatttataaacaggagaaaagtgatg
gataagcaggtttcgacatctaaaagagagtccaaggatggaggtagccaaggtatggag
aagaaagctaagtgctag
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