Salvia hispanica (chia): 125190760
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Entry
125190760 CDS
T09851
Name
(RefSeq) nuclear transport factor 2-like isoform X1
KO
K24983
Ras GTPase-activating protein-binding protein 2
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shis03019
]
125190760
Messenger RNA biogenesis [BR:
shis03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
125190760
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NTF2
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
125190760
NCBI-ProteinID:
XP_047944105
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Position
5:39716547..39719783
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AA seq
468 aa
AA seq
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MAAALVAQQLVTASVVGNAFVTQYYHILHLSPGHTHRFYQDISMLGRQEEDGTMTITTTM
EAINAKILSLNNNMFKAEIKSVDSQESFSGGVHVLVTGCMRAEDNSCYTFVQSFFLAPQD
KGYFVLNDTFRYLDSVPANPAVVNDVVVPASTELVSAVPATIVENHVPVNEDSAPPVGEA
VAGEVSAVPATIVEEEISVAEVVDEVEDDAQKIVESSAKIEELPKKSYASIVSRTQGNVA
SSPPPQVTPRKAPPMSVEPVHPPSAPATVGPVSGSEVVDNGNNPDGEADGYSIYIRGLPM
NATESLLEEVFKKFGTIKPDGIQVRSNRHQAFCFGFVEFEDASSVEKALEASPVTIGARK
AFVEEKRSTNTRGNPKGRFQPGRGSGGFRNEGVRGRGNYGGGRGYGRGDFNGRGGEFGGR
GGRSSNRDGYQRSENMSNNGGSHMNRTGGFPNGNTNSVAVAPRVSATA
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggcgttagtagctcagcaacttgttactgctagtgttgttgggaacgcattt
gtgacgcagtattatcacattctgcatctatcgccggggcatactcatcgattttatcag
gacataagtatgcttggtcgtcaagaggaggatggcaccatgaccatcaccaccactatg
gaagccatcaatgcgaagattctttccctgaacaataatatgttcaaagcagagattaaa
tcagtagattctcaagagtcctttagtggtggagttcatgttcttgtgactggctgtatg
agggcggaggacaactcatgctacacttttgtgcagtcatttttccttgccccgcaggac
aagggttactttgttttgaatgatacgtttcggtatttggatagtgtccctgcgaaccca
gctgtggtcaatgacgttgtggtgcctgcctctactgagctagtatctgccgtcccagca
acaattgtggagaatcatgtccctgtcaacgaggatagcgcacctcctgtgggagaagct
gtggcaggagaagtatctgctgtcccagcaacaattgttgaggaagaaatctcggtggct
gaggtcgttgatgaagttgaagacgatgcccaaaagattgttgaatctagtgccaaaatt
gaagaattgccaaagaaatcttatgcctctattgtaagtaggacacagggaaatgttgca
tcttccccacctccacaagtgactcctcgaaaagctccaccaatgagtgtagagccagtg
catccaccttctgccccagcaactgttggacctgtttctggttcggaagttgttgataat
ggaaataacccagatggtgaagctgatggttactcaatatacataaggggtctccctatg
aatgctaccgagagcttacttgaggaagtattcaagaaattcggtactatcaagcccgat
ggaattcaagtcaggagcaacagacatcaagccttttgttttggctttgtggaatttgag
gatgcaagttctgtagaaaaagctctcgaggcttctcccgtgacaattggtgcacggaaa
gcatttgttgaggagaagaggtctactaacactcgaggaaatcccaaggggagatttcaa
ccaggaagaggttctggtggattcagaaatgaaggagtaagaggacgtgggaactacgga
ggtgggaggggatacgggaggggtgatttcaatggaaggggtggtgagttcggtggcagg
ggtggcaggtcctcaaatcgcgatggatatcagaggtctgaaaacatgagcaacaatggt
ggcagtcacatgaaccgcactggtggcttcccaaacggcaacacaaatagtgtcgctgtc
gctcctcgggtttctgctactgcttga
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