Salvia hispanica (chia): 125190891
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Entry
125190891 CDS
T09851
Name
(RefSeq) pre-mRNA cleavage factor Im 25 kDa subunit 1-like isoform X1
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
shis
Salvia hispanica (chia)
Pathway
shis03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125190891
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shis03019
]
125190891
Messenger RNA biogenesis [BR:
shis03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
125190891
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Gene cluster
GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
125190891
NCBI-ProteinID:
XP_047944264
LinkDB
All DBs
Position
5:13876827..13880262
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AA seq
160 aa
AA seq
DB search
MLSFKHLFAYMLVDCASSDFEVELFKHPHLLLLQVQNSFYKLRGGESDIDYLIHKLSSKL
CAGEGSRDPEWEVGECLGMWWRDFESLLYPYLPPNIKRPKECIKLYLVKLPPSRRFIVPK
NFRLLAIPLCQLHENGETYGPIVSGVPQLLSKCSFNMIEP
NT seq
483 nt
NT seq
+upstream
nt +downstream
nt
atgctgagttttaagcatttgtttgcctatatgttggtcgattgtgcctcttctgatttc
gaggtagaacttttcaaacacccccatctcttgttgctacaagttcagaactccttttac
aaacttcgtggtggtgaatcagatattgactacttaatacacaagctctcgagcaagcta
tgtgctggtgaaggtagccgtgatcctgaatgggaggttggagaatgccttggtatgtgg
tggagagactttgagtccctgctttatccgtatttgccaccaaatataaagaggcctaaa
gagtgcattaaactatatcttgtgaagctgccaccgagcagaaggtttattgttcctaag
aacttcagacttctcgctatcccattgtgccaacttcatgagaatggagagacttatggt
ccgatagtctctggagtcccacagttgctatccaaatgttctttcaacatgatagaacct
taa
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