KEGG   Salvia hispanica (chia): 125191149
Entry
125191149         CDS       T09851                                 
Name
(RefSeq) UBP1-associated protein 2C-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
shis  Salvia hispanica (chia)
Pathway
shis03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:shis00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125191149
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:shis03019]
    125191149
   03041 Spliceosome [BR:shis03041]
    125191149
Messenger RNA biogenesis [BR:shis03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     125191149
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     125191149
Spliceosome [BR:shis03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    125191149
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_Nup35 PHM7_cyt RL
Other DBs
NCBI-GeneID: 125191149
NCBI-ProteinID: XP_047944591
LinkDB
Position
5:11450680..11453355
AA seq 331 aa
MEDLKKRKLDALGNSEVSPNSKDSTANSTIEELRALLDPLAKPQLVDILARAGSQYPSIA
EEIKSVASADPALRKLFVRGLAWNTTSETLCAAFIEHGEIEEGAVIYDKVTGKSRGYGFV
TFKDMESAQTALKAPSKMIDGRMAVCNLASEGLSSNSVTPDQAQRKLYVGGLSPETTSEM
LLAFFSRHGDIEEGSVAYEKETNKSRGFGFVTYKTVEAAKRAIDDPQKLLGGRNITAKLA
DNYKGKVTQSQIPSSAVPVPVHMNGGAPMGYGYPQPMAAYPPASYTNPQTAAAPPYAVLP
HYSYPQYGVKKDTPPPQTAMGGYPSYYMPKQ
NT seq 996 nt   +upstreamnt  +downstreamnt
atggaggatttgaagaagaggaagctagacgcattggggaacagcgaggtgtcgcccaac
tccaaagattcgaccgcgaattcaactattgaggaattgcgcgcgcttcttgacccgctc
gctaagccgcagctcgttgatatacttgctagagctgggtcccaatatccttctattgct
gaagaaattaaaagtgttgcaagtgctgatcctgcccttcgaaagctttttgttcggggt
ttagcatggaatactacttcagaaactttgtgtgctgcctttatagagcatggtgaaatt
gaagagggtgctgtgatatacgacaaagtgacaggaaaatcgcgtggttatggttttgtt
acttttaaagatatggagtctgctcagacagctctaaaagcacctagtaaaatgatagat
ggtcgtatggctgtttgtaaccttgcgagtgaaggactaagcagcaacagcgtaacacct
gatcaagcccaaaggaaattgtacgttggtggtttgtcacctgagacgaccagtgaaatg
ctgctcgccttcttcagtaggcacggtgatattgaagagggttctgttgcttatgaaaag
gaaacaaataaatcacgcggtttcggctttgttacctacaagactgtcgaggcagcaaag
agagctatagacgaccctcaaaaattgctcggaggaagaaacatcactgccaagctagcc
gataactacaaagggaaggttacacaatcacagataccatcatccgcggttccagtgcct
gtacatatgaatggtggagcccctatggggtacggctatccccaaccgatggcagcatat
ccgcctgcttcctacacaaacccacaaacagcagcagctcctccatatgctgtccttcca
cattactcttatcctcagtacggtgttaagaaagacacgcctcctccacaaacggccatg
gggggctacccttcttattacatgcccaagcaatga

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