Salvia hispanica (chia): 125191200
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Entry
125191200 CDS
T09851
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
shis
Salvia hispanica (chia)
Pathway
shis03015
mRNA surveillance pathway
shis04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125191200
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
125191200
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
shis01009
]
125191200
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shis03019
]
125191200
03036 Chromosome and associated proteins [BR:
shis03036
]
125191200
Protein phosphatases and associated proteins [BR:
shis01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
125191200
Messenger RNA biogenesis [BR:
shis03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
125191200
Chromosome and associated proteins [BR:
shis03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
125191200
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_IFT122_1st
WD40_Prp19
Beta-prop_THOC3
Beta-prop_NOL10_N
WDR55
WD40_CDC20-Fz
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR3_2nd
Beta-prop_TEP1_C
Motif
Other DBs
NCBI-GeneID:
125191200
NCBI-ProteinID:
XP_047944666
LinkDB
All DBs
Position
5:22077795..22082098
Genome browser
AA seq
510 aa
AA seq
DB search
MSFSSDSSSSSPAAALDWKFSQVFGDKLPGEDVRDIDVISAIEFDKSGDHLAVGDRGGRV
VIFQENGAKDDLVRSTPRNELERLDRVIAKHPKYHYKTEFQSHEPEFDYLRSVEIEEKIN
KVRWCAASTGSLNILSSNDKTIKLWKVKDRQVKQVKEIETSQPISSENSLLGEKSFINGQ
KSSFVNGHSLEWKENIGNGVSSYDGTNDKIACLEDASVSRTRKVYAHAHDFSINSISVNS
DWETFLSGDDLRINLWNLEVSNQCFNIIDMKPVNMEDLIEVITAVEFHPSHCNLLAYSSS
RGFIRLVDMRKSALCDHSATILKDEEFHGQKSFFTEIIASITDMKFANDGRHILSRDFMN
LKLWDMHMDSGPVATIRIHENLRPKLADLYNNDAIFDKFECCVSKDHLNFATGSYSNILR
VFSNGSGAEGVTIEASRNPTRKPQGQTTSRPRRSSLSNIARGFYRQVDGRGAESNDFSYD
FNSKLLHMAWHPSTNLIACAAGSSLLMYHA
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcagctcggactcttcctcttcgtcgccggccgccgctctggactggaaattc
tctcaggtcttcggcgataaactacccggtgaagacgttcgcgacattgatgtaatttcc
gcaattgagttcgacaaaagcggcgatcacttggccgtcggcgatcgaggcggccgcgtc
gtcatttttcaggaaaacggtgctaaagatgacttagtccgatccactccacggaacgag
ttggagagacttgatagagttattgcgaagcatcctaaatatcattacaaaacggagttt
caaagtcacgagccagagtttgattatttgaggagtgtggagatcgaagaaaagatcaat
aaagttaggtggtgtgcagcatctactggatcactaaatattctatcatcaaatgataag
actatcaaattgtggaaggtcaaggatcgtcaagttaagcaagtcaaagagatagagacg
agtcaaccaatatcttcagagaactcacttttaggtgaaaagagttttattaatgggcaa
aagtcatcttttgtcaatggccattctctagaatggaaagaaaacatagggaatggcgtg
tcttcttatgatggaacaaatgacaagatagcatgtttagaagatgctagtgtttcaaga
actcgaaaggtgtatgcgcatgctcatgatttcagtatcaactctatctctgttaatagt
gattgggagacatttctttctggagatgatctgagaataaatttgtggaatctagaagtc
agcaatcagtgttttaatatcattgacatgaagcctgtaaacatggaagatctcatagag
gtgatcacagcagttgaattccatccatctcactgtaatctgctagcttacagcagttca
agaggttttattcggctagtagacatgagaaaatcagcactatgtgatcacagtgcaacg
atactaaaagacgaggaatttcatggtcagaaatctttcttcaccgagatcattgcgtca
ataactgatatgaagtttgcaaatgatggaagacatatattaagccgtgatttcatgaat
ctgaagctatgggatatgcatatggactctggtccagttgcaacaattaggattcatgaa
aacctacggccgaagttggcagatctgtacaacaatgatgcaatatttgataagtttgaa
tgctgtgtttctaaagaccaccttaattttgcaactggatcttacagcaatattctacgt
gtgttctctaacggaagtggggctgaaggagtaaccattgaagctagtcgaaacccaact
agaaagccccaaggccaaaccacatcaagacctcgaagatcttctctaagcaacatagct
aggggattctacagacaagttgatggacgtggtgcagaaagtaacgatttttcgtacgat
ttcaattctaagttgctgcatatggcttggcatccatcaactaatctgattgcttgtgct
gctggaagcagcctgctaatgtatcatgcctaa
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