Salvia hispanica (chia): 125191235
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Entry
125191235 CDS
T09851
Name
(RefSeq) ADP-ribosylation factor GTPase-activating protein AGD3-like
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
shis
Salvia hispanica (chia)
Pathway
shis04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125191235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shis04131
]
125191235
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shis04147
]
125191235
Membrane trafficking [BR:
shis04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
125191235
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
125191235
Exosome [BR:
shis04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125191235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
Ank
Ank_2
PH
BAR
Ank_3
Ank_4
Ank_5
PH_11
ANK_LRRK2
PH_8
PH_20
PH_13
Hydro_N_hd
Laminin_II
DUF842
CTD8
Motif
Other DBs
NCBI-GeneID:
125191235
NCBI-ProteinID:
XP_047944708
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All DBs
Position
5:5069486..5077619
Genome browser
AA seq
789 aa
AA seq
DB search
MQEENMFFARLDDSPMFRQQIQLMEESADTIKERSLKFHKGCRKYVDGLGEAYDRDISFA
SGLETFAGGHNDPISVAFGGPDMEKFAIVLREIGTYKETLRSQVEFVLNEKLTQFANVVQ
DIKDAHKRFDKATVIYDQVRDKFLSLRKSARIDIASTLEEELHNARSIFEQTRFNLVGAL
SAVEAKKKYEFVEAIGNTMDAHLRYFKQGYELLHQMEPCINQVLASAQEARENSNHEISN
LNERMQDYIKQVDEAGKKPTESPRVDATQPVFRSSQKVIEEVMHAAAGGKVQTIKQGYLS
KRSSNLRGDWKRRFFVLDSRGMLYYYRKQWNRPFYGGSSQTPMHKNTPSDSGSGLLSRWL
SSHYHGGVNDEKSVARHTVNLLTSTIKVDAEQVDLRFCFRIISPSKNYTLQAENSAEQMD
WIEKITGVITSLLQAPEFCFSPGSECGSVETPDHDLKTTQSFKTKKDRSARSIMQATRST
LKFQANLKKEKPIDALSKVPGNDKCADCGAPDPDWASLNLGVLICIECSGIHRNLGVHVS
KIRSLTLDVKVWEPSVISMFQALGNVFVNSIWEGLLRANRTIQADELPIRSFESEKYRQF
FTKPHHAGQTALKEKYITAKYVEKSFVPKLKESEQLVSAAEQLWESVRKNDKKAVYRLIV
LSGADVNAGYGQGMKSNKQENPDPNVPAMEEDELFDGCSLLHLACHSADISMVELLLQNG
ANISACDSKGQTPLHHSISRGGNAITKLLLTRGANAEAVDKSGKTPLQLVTESAIDDAEI
LALMKNAAR
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaagaaaacatgtttttcgctcgactagacgattcgcccatgttccgtcaacag
atccagttgatggaagaaagtgccgatacaataaaggaaagaagtctaaagtttcataaa
ggttgtcgaaaatatgtagatggccttggagaagcatatgatagagatatatcgtttgca
agcggccttgaaacatttgctggaggacataatgatcctatctctgttgcatttggaggc
ccggatatggaaaagtttgcaattgtactgagggaaattggaacatacaaggaaactctt
cggtcacaggtagagtttgtgctgaatgagaaacttacgcaattcgctaatgttgtccaa
gacattaaggatgcccacaagcgctttgacaaggctactgttatttatgatcaggttcga
gataaatttttgtcattgagaaaaagtgcaaggatagacatagctagcacgctagaagag
gaactccacaatgcaagatcaatttttgagcaaacacgctttaatctggttggcgccctt
tcagctgtcgaggcaaagaagaagtatgagtttgtagaggccattggcaacacaatggat
gcccatcttcgttatttcaagcaagggtacgagctattgcatcaaatggagccctgtatt
aatcaggttttggcttctgcacaagaggcaagggaaaattcgaaccatgagatatcaaat
ctcaatgaacggatgcaagattacataaagcaagttgacgaagcaggaaaaaagcctact
gaatctccacgtgtagatgccacacaacctgtttttagaagctctcagaaagtgatagaa
gaagtgatgcatgctgctgctgggggaaaggtacaaaccatcaaacaaggatatctctct
aaacgttcctccaatttgagaggagactggaagagaagattttttgttcttgacagccgg
ggaatgttgtactattatcggaagcaatggaataggccattctatggaggcagcagccaa
actcccatgcacaaaaataccccgtctgattcaggctccgggctattgagtaggtggctt
tcttctcactaccatggcggtgtaaacgatgagaaatctgtagcacgccatacggtgaac
ttgcttacatcaacaataaaagtggatgcggagcaggttgacctaagattttgtttcagg
attatttcaccttcaaaaaactacactttacaggcagagaattcagcagagcaaatggac
tggatcgaaaaaataacaggagttattacttctttgctacaagcacccgaattctgtttc
agtccaggtagtgagtgcggttcagtagaaactccagatcatgatttaaagactacccaa
agctttaaaactaagaaagatcgttcagcaagaagtataatgcaagccaccagaagtact
ctaaagtttcaagctaatttgaaaaaggagaagccaatcgacgcattgagtaaagtgcct
ggaaatgataaatgtgccgactgtggtgcacctgaccctgattgggcatccttgaatctt
ggtgttcttatatgcattgaatgctctggcattcatcgtaaccttggggtgcatgtatct
aagataagatccttaacacttgatgtgaaagtctgggaaccttccgtcatttctatgttt
caagcgctgggtaatgtctttgtcaattccatatgggaagggttattgcgagcaaataga
actattcaagctgatgaactaccaatacggtcgtttgaatctgagaaatacagacagttt
ttcaccaaacctcatcacgctggtcaaacagctcttaaggagaagtacatcactgcaaag
tatgtagaaaaaagttttgttcccaaactaaaggagagtgagcaacttgtttcagctgct
gagcaattgtgggaaagcgtccgtaaaaatgacaagaaagctgtctaccgccttattgtt
ttgtcaggagcagatgtcaatgcaggttatggtcaaggaatgaaatcaaacaagcaggaa
aatcctgatccgaatgtccctgctatggaagaagacgagctttttgatggttgttcgttg
cttcacctggcctgtcattcagctgatatcagcatggtggaactgctcctccagaatggg
gcaaatatcagtgcttgtgattccaagggtcaaacaccattgcatcatagcatttcaagg
ggtggaaatgcaatcaccaaactcttgctcacaaggggagccaacgcagaagctgtcgac
aaaagtggtaaaacccctcttcagctcgtcacagaatcagccatcgatgacgccgagatc
cttgctctaatgaaaaatgctgccagatag
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