Salvia hispanica (chia): 125191629
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Entry
125191629 CDS
T09851
Name
(RefSeq) probable starch synthase 4, chloroplastic/amyloplastic
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis00500
Starch and sucrose metabolism
shis01100
Metabolic pathways
shis01110
Biosynthesis of secondary metabolites
Module
shis_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
125191629
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
shis01003
]
125191629
Enzymes [BR:
shis01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
125191629
Glycosyltransferases [BR:
shis01003
]
Polysaccharide
Storage polysaccharide
125191629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_5
Glyco_transf_4
Glycos_transf_1
Glyco_trans_1_4
Glyco_trans_4_4
COG4_N
HOOK
ACT_5
DUF4750
Phage_TAC_4
Motif
Other DBs
NCBI-GeneID:
125191629
NCBI-ProteinID:
XP_047944980
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All DBs
Position
6:44053972..44061335
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AA seq
1052 aa
AA seq
DB search
MESAPSTCFLRRGLVGAGLKSPQVTVRLYSSSWQRWYPTSCKMRQRNFSSQNKRQQAKKI
NLPTNTRLNQIDDSNTDTSSRDRGGISPTNTNSKPNDDSGSPKGSNSDSDQEIDSSNNIP
VIEYGYLEGEGYFNSSEPDEVGALHNDTVATAEGSVHLNDEKTKRHILSNDIPSTTGNRG
QQRSGSQLHDLIGMIRSAEKNIHLLNDARMRALEDLENVLSEKESLQGEINSLEMKLVET
DARLKVAAQEKIHVELLQAQLEKLRSELSSREELEQDLNNVVSSSQIDVVSSFSQELDSL
RAENMTLQDELQALKAELSRIRETDQRVQTLEDERSLLQSSFKELEFKLAASDEDVSEIS
SLKSECKSLYEKVEDMQTLLDKATEQADQAILALRQNQELRKKVDQLEESVSETSDYKLS
SEKLQQYTELMQQRIDLLDDRLQNSDEEVHSYFKLCQDSIKEFQDKLNALKEESKKRAED
ESVHDKPSEFWSNLLLLVDGWFLEKKISLDQVNLLREMIWNREQSICDSYMSMQGKSERE
IIATFLKLTTSTTGERLHVIHIAAEMAPVAKVGGLGDVVTGLSKALQRKGHLVEVIVPKY
DCLQYESIRDLKVLNMHVESYFDGRLFKNKIWVGTVEGIPVYFIEPLHPSKFFWRNQFYG
ENDDFKRFSYFSRAALELILQAGKKPDIIHCHDWQTAFVAPLYWDLYVPKGLDSARICFT
CHNFEYQGSAPASELGSCGLDVHQLNRPDRMQDHSAHDRVNPIKGAVVFSNIVTTVSPTY
AQEVRSSEGGRGLQDTINTYSKKFVGILNGIDTDAWNPATDPFLKVQYHSNDLDGKAENK
AALRRHLQLSSANDRQPLVACITRLVPQKGVHLIRHAIYRTLELGGQFVLLGSSPVPEIQ
REFEEICDSFRTHEHARLILKYDEALSHLIYAASDMLIIPSIFEPCGLTQMIAMRYGSVP
IVRKTGGLNDSVFDFDDDTIPAHYRNGYTFLTANEQDFSNALQRAVNHYMNDADSWKQLV
QKVMSLDFSWDSSAPLYEELYHKSVARARSRK
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atggagtcggcgccgtcgacgtgctttctccgccgcggattggtcggcgccggactcaag
tctcctcaagtcactgtgcgtctctactcttcctcctggcagcgctggtacccaacctct
tgtaaaatgcgccagcgcaacttcagttcgcaaaataagaggcaacaagcaaagaaaatc
aatctcccaacaaatacaagattaaatcaaattgatgatagcaacactgatacaagcagc
agggacagaggcgggatttcaccgacaaatacaaattccaagccaaatgatgatagcgga
tcgcccaaaggcagcaactcagattcagatcaagaaatagattccagcaacaatattccc
gtaatagaatatggatacttggaaggagagggttacttcaattcttctgaaccagatgaa
gttggagcgttgcacaatgacactgtcgccactgcagagggatcagttcacttaaatgat
gaaaaaactaagaggcatattctgtcaaatgacatcccatccaccactgggaatagagga
cagcaacgctcgggcagtcaacttcatgatttaattggaatgatacgaagtgctgaaaag
aatatacatcttcttaatgatgctcgtatgcgtgctcttgaggatcttgaaaatgttctc
agcgaaaaagagtcattgcagggagaaatcaacagtttggagatgaaactggttgaaact
gatgcacgtctgaaagtggctgcacaagagaagatacatgtggaactcctccaagcccag
ttggagaagttgcgaagtgaattgtcaagcagagaggaacttgaacaggacttgaataat
gttgtttcttcatcgcaaattgacgtcgtcagttcttttagccaggaattagattcatta
agggcagagaatatgaccctgcaggatgagctacaggccctaaaggcagagcttagtcgt
attagggaaactgaccagcgtgttcaaacattggaggatgaacggtcattgttgcagtcc
tccttcaaagagttggagttcaaacttgctgcttctgatgaagatgtttcagaaatctct
agcttgaaatctgaatgcaagagtttatatgagaaagtggaggatatgcagacgctttta
gataaggcaacagagcaggcagatcaagcaattctagcattgcggcaaaaccaagaactc
cgcaagaaggttgaccagcttgaagaatctgtcagtgagaccagcgactataaactgtca
tcagagaagttgcagcaatatactgaactaatgcagcaaagaatagatctattggatgat
cgcctgcaaaattctgatgaagaggtacatagctattttaaattgtgtcaagactctata
aaggaattccaggacaagctgaatgccttgaaagaagaaagcaagaaaagggcagaagat
gaatctgtgcatgacaagccttctgagttttggtccaatttattgcttttggtggatgga
tggtttcttgaaaagaagatctcactggatcaagtgaacttattaagagaaatgatatgg
aacagagaacaaagcatatgtgattcatatatgtcgatgcaaggaaaaagtgagagggaa
attattgcaacatttctcaaactaacgacgtcaacgacaggtgaaaggttacatgtcata
cacattgcagcagagatggcacctgtggctaaggtgggtggactgggagatgtagtgact
ggtcttagcaaagcgcttcagaggaaagggcaccttgtggaagttattgtaccaaaatac
gactgcctacagtacgagagcatccgggatttgaaggttttgaatatgcatgttgagtca
tattttgatggtagactgttcaaaaacaaaatctgggttggcactgttgaagggattcct
gtttatttcattgaacctcttcatccaagtaaattcttctggaggaatcaattttatgga
gagaatgatgattttaagagattttcatacttcagcagggcagcacttgagttaattctt
caagctggaaagaagccggacataattcattgtcatgattggcagacagccttcgtcgca
cctctttattgggatctatatgttccaaaaggattggattcagccagaatatgttttaca
tgtcacaattttgagtatcaaggatcagctccagcttctgagctcggatcttgtggtctt
gatgttcaccaactcaatagacctgataggatgcaggatcattccgcacatgacagggtc
aaccccattaagggtgctgtggtgttctctaatattgtgacaacagtttcaccaacctat
gcccaagaggtgcgaagttcagagggtggacgaggcctacaggacacaattaacacatat
tcaaagaaatttgtcggaattttgaatggcattgatactgatgcatggaatccagcaact
gacccatttttaaaggttcagtatcattccaatgatcttgatggcaaagcagaaaacaaa
gcagctttgaggagacatctgcaattgtcttcagctaatgacagacagccattggttgct
tgcataactagattggtacctcagaagggtgtacatcttataaggcatgcaatataccgg
acattggagttaggtggtcaattcgttcttcttggttcaagtccagtgcctgagattcag
agggagtttgaagaaatctgtgatagttttagaactcatgaacatgctcgattaatactg
aaatatgacgaggctctttcacacttaatctatgctgcatcggacatgttgatcatccca
tccatcttcgagccttgtggcctcactcagatgattgctatgagatacgggtcagttccc
atcgttaggaagactggagggctcaacgacagtgttttcgattttgacgacgataccata
cctgcccattacagaaatggatatacattcttgacagctaatgagcaggatttcagcaat
gcgttgcaacgggcagttaaccattacatgaatgatgctgatagttggaaacagcttgtt
caaaaggtgatgagcttggattttagttgggattcttcagcaccattgtatgaagaactt
tatcacaagtctgtcgccagagcgaggagcagaaaatga
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