Salvia hispanica (chia): 125191942
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Entry
125191942 CDS
T09851
Name
(RefSeq) uncharacterized protein LOC125191942
KO
K20523
SH3 domain-containing YSC84-like protein 1
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shis04131
]
125191942
Membrane trafficking [BR:
shis04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
125191942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ysc84
FYVE
RTP
FYVE_2
Motif
Other DBs
NCBI-GeneID:
125191942
NCBI-ProteinID:
XP_047945334
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Position
6:complement(43185284..43188527)
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AA seq
623 aa
AA seq
DB search
MDFSHETSDLQSFKDHGENVTGSRSSVVLAEVSVSDFCSKQENRESNMKVSPMTQHDDLE
NFLELAENPSEDSMRQIISDTGKLDLKSSPDGVGQSVYDHDISSSADSGDGLLKCEGEPN
TRNGDPAHLISRTNGSDSSLTVDNDEGNTTLDPHIGTMNINGALSPQNIVVDSNGDSGSR
NCEEGKYFYYETPLCEDTGAWIPVSVPPMTENDREEWTRGRCSNGGYVPEEDMGWNQYIG
EDKELTMWDVVVEMLLAARGKLNSLASGDIIGMSLISTQLVEQAWKEMAQTLTEANFSST
QEILESEPPKWLPDSSASSCMLCGVRFHPIMCTRHHCRFCGGIFCNECTKGRSLLPENFR
TGDPQRVCDVCCVRLESVQPYLMNQVSRASQFPTHDLTDLSTLRSWVNFPWGQTMEYEIY
KAANTICSYASVGLRQEKRIPEAILRDAKGLAILTVVKVGAVVTYNVGTGLVVALREDGS
WSPPSAISSFGVGWGAQAGGELTDFIIVLRTYDAVKTFCSDAHVSVGAGASAAVGTIGRT
AEAGLRAGDGGYAACYTYSCSKGAFIGCSLEGSVVTTRARENSRFYGSQSLDALKILLGS
LPQPPAAATLYRALEDLYRQMER
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggatttttctcatgaaacaagtgatcttcaatcgtttaaggaccatggggagaatgta
acgggtagcagaagctccgttgtcctagctgaagtgtctgtttctgacttttgttctaag
caagaaaaccgggaaagtaatatgaaagtgagtcctatgacccaacacgatgatttggaa
aactttcttgaattggctgaaaatcctagcgaggactctatgcgccaaattatatccgat
actgggaaacttgacctcaagtcttcacctgatggagtaggacagtcagtttatgatcat
gacatatccagttctgctgattcgggtgatgggttacttaagtgtgaaggggagcctaat
actaggaatggagatccagctcatctaatatctaggactaatggatctgattcttcgtta
actgtagacaatgatgaagggaatactactttggatccacacataggcactatgaatatc
aatggggcactgtcaccccaaaatatagtggttgatagcaatggagattcgggttccaga
aattgtgaagaagggaagtacttctattatgaaacacctctttgtgaagacacgggggct
tggatacctgtttctgtccctccaatgactgaaaatgaccgcgaagagtggaccagaggg
cgctgctcaaatggtggttacgttccagaagaagatatgggctggaatcagtacattggt
gaagataaagaattgaccatgtgggatgtggtggtggagatgttacttgcagcgcgtgga
aagttgaattctcttgcttctggggatattataggaatgtcgttgatatccacccagtta
gttgagcaagcatggaaggaaatggctcagaccctgacagaggccaatttcagtagcacc
caagaaattctcgaatcagagccacctaaatggctgccggatagctctgcttcttcttgt
atgctttgtggtgtgcgtttccatcctatcatgtgcacaaggcatcattgcaggttttgc
ggagggatcttttgtaatgagtgtaccaaaggaaggagcttgttgcctgaaaatttccgt
accggagatcctcaaagagtttgtgatgtatgctgtgtgcgcctcgagtctgtgcagcct
tacttaatgaatcaagtgagtcgtgcttcgcagttcccaactcatgatttgacagacttg
agcactttaagatcttgggtgaatttcccatggggacaaacgatggagtatgagatttac
aaggctgcaaacacaatctgtagctatgctagcgttggtttgagacaagagaagagaatt
ccagaagccattttgcgagatgcaaaggggctcgcgatacttacagttgtgaaggttgga
gctgtggttacctacaatgttggaactgggttggtggttgctcttagggaagacggatct
tggtctccaccctccgccatttcttcctttggtgtcggctggggcgcacaggcaggagga
gagttaaccgacttcataatcgtgttgagaacatacgacgctgtgaaaaccttctgcagc
gatgcacacgtctcagtcggagccggtgctagtgctgctgtaggaaccattggtcgtact
gcggaagctggtttgagagctggtgatggtggatacgccgcttgctatacatacagctgc
agtaaaggtgccttcatcgggtgctctctcgaaggaagcgtggtcacaacccgtgctcgg
gagaattccagattttatggcagccaatcactcgacgcgttaaagattcttctgggttcg
ttacctcagccgcctgcggcagccactctttaccgggcactggaagacttgtataggcag
atggagagatga
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