Salvia hispanica (chia): 125191987
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Entry
125191987 CDS
T09851
Name
(RefSeq) polygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis00040
Pentose and glucuronate interconversions
shis01100
Metabolic pathways
Module
shis_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
125191987
Enzymes [BR:
shis01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
125191987
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GFIT
Motif
Pfam:
Glyco_hydro_28
DUF5123
Motif
Other DBs
NCBI-GeneID:
125191987
NCBI-ProteinID:
XP_047945395
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Position
6:complement(47123606..47125226)
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AA seq
408 aa
AA seq
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MEQMHVITLTIFGVLLLPLSAYADVYDVSQHGVQNGDITDALLKAWELAVQAPTASKVLI
PKGEWTLKQALLDGPNKAPIEFQVEGTVTAYSDPFDLPDNKGEWWIGMNYLHSLTVSGGG
VFDGNGKVAWTKNECHKNTPCLSKRLPYNLSFNFINNSIITDITIKDSKYFQSNCISSNN
VTFQRITISAPAESPNTDGIHIARSVNIKVLDSVIGTGDDCISFGDELQDVLIKNVRCGP
GHGISIGSLGKTNEEKDVTGITIDNCTFINTDNGVRIKTWPSTPSTLKVTDIKFTNLIME
NVSNPVIIDQEYCPWNMCSLDKASLVQISKVNIDNIKGTSATQDALIFSCSSSKPCQDVQ
IGNIDLRFTGDPTLGGATTKCQNVKYVSTGKQNPPLCVKTSAPKPLPK
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaatgcatgtaatcacactcacaatatttggtgtccttctattgccgctttcg
gcatacgcagacgtctacgatgtcagccagcatggagtccagaatggagatataaccgat
gctctgctgaaagcatgggagctggcagtgcaggcgccgacggcgtcaaaggtgttaata
cccaagggtgaatggacgctgaagcaggctcttctcgatggacccaacaaggcccctata
gagtttcaggtggaaggcaccgtgacagcctattccgaccctttcgacctccctgacaat
aagggagaatggtggattggcatgaactacctccactccctcactgtctccggcgggggg
gtcttcgatggcaacggcaaagtcgcctggaccaagaacgaatgccacaagaacaccccg
tgcctgagtaaacgactcccctacaacctcagcttcaacttcatcaacaactccatcatt
acagacatcaccatcaaagacagcaagtacttccagtccaactgcatctctagcaataac
gtcaccttccagcgaatcacgatcagcgcccctgctgaaagcccgaacaccgacggcatc
cacatcgcccgcagtgtcaacattaaggtcctcgactccgtcattgggaccggcgatgac
tgcatctccttcggcgacgagctccaagatgtcctcatcaagaacgtcaggtgtggccct
gggcatggcatcagcatcggcagcctcggaaaaaccaacgaggagaaagacgtcactggg
atcaccatagataactgcacattcattaacactgacaatggggtcaggatcaagacctgg
ccttccactcccagcaccttaaaagtcactgatatcaaattcaccaatcttatcatggaa
aacgtcagcaatcccgtcattatagatcaagaatattgcccctggaatatgtgctccctc
gacaaagcatcgctggtccagattagtaaagtgaatattgataacatcaagggtaccagt
gccactcaggatgcactcatattctcttgcagctcaagtaagccatgtcaagatgtgcag
attggaaacattgatctcaggttcaccggagatcctacactcggcggagccaccaccaag
tgccagaacgtcaagtatgtttccaccggcaaacagaatccacctctctgtgtcaagacc
agcgcccctaaacctctacccaagtag
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