Salvia hispanica (chia): 125192520
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Entry
125192520 CDS
T09851
Name
(RefSeq) structural maintenance of chromosomes protein 2-1-like
KO
K06674
structural maintenance of chromosome 2
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shis03036
]
125192520
Chromosome and associated proteins [BR:
shis03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
125192520
Condensin II
125192520
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_29
DUF7310
CENP-F_leu_zip
ABC_tran
bPH_2
Motif
Other DBs
NCBI-GeneID:
125192520
NCBI-ProteinID:
XP_047946076
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All DBs
Position
6:complement(17215569..17223484)
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AA seq
1176 aa
AA seq
DB search
MHIKEICLEGFKSYATRTVVPGFDPYFNAITGLNGSGKSNILDSICFVLGITNLQQVRAS
NLQELVYKQGQAGITKATVSIVFDNSDRSRSPLGYEDSPEITVTRQIVVGGRNKYLINGH
LAQPSRVQNLFHSVQLNVNNPHFLIMQGRITKVLNMKPPETLSMLEEAAGTRMYETKKEA
ALKTLEKKQSKVDEIDKLLDQEILPALQKLRKERMQYMQWANGNAELDRLKRYCIAYEYV
QAEKNRDNTVQGVQAIRDKMLEIDSTVGKLHEETQEMETQISKLIAEKEASMGGELKILS
EKVDVLSRDLVKETSAFQSQEDNLKTEKDSVAKIERNLQESKLAAEEKATAIKTAEDGAS
DLKINFQKLSNSLDEHQKEFQGVMAGKSSGNDEKCLEDQLGDAKKAVGKSETELKQLQNQ
INHVDKELKEKKTQLVSTSAKAAAIENELNVKRKEVVTVEKELESLSYDDTLMESLQKDR
MIESETVQKLERKAREVSSRLGRVEFNYRDPENNFDRSRVKGVVAKLIKVKDGSAAVALE
VAAGGKLFNVVVDTENTGKQLLQKGGLQRRVTIIPLNKIQSHPVSKRIQDAAVKLVGQGN
AAVALSLVGYDHELQSAMEYVFGSTFVCKSIDAAREVAFTRETATPSVTLEGDIFQPSGL
LTGGSRKGGGELLMQLHALAEVELELSTHLKRLSDIEAKINELLPHQRVFENLKKDLVLK
SHELRLLEERAKQTEHHQLREWVQSTEEKLAEAKSAIIDKKVLYDECVTRVSSLEKSIHD
HAGNRESRLKDLEKKIKAIKTQMQAASENLRRHETDRERLIMEMEANKKECLSLESQLEA
LNKHIEDLSSELDSQRTKISSIKKSRDEVQAEHNMASRKIKECDSQISGIVKKQKDIQQK
ISEFNLERKRMENEVKRMEMDQKDCAMKVDKMIEKHAWIASEKQLFGRAGSDYDFGSRDP
LKAREDFEKLQAEQSGLEKRVNKKVMAMFEKAEDEYNDLLSKKNIIENDKSKIKMVIEEL
DEKKKETLKVTWNKVNKDFGSIFSTLLPGTMAKLEPPEGGSFLDGLEVRVAFGSVWKQSL
SELSGGQRSLLALSLILALLLFKPAPLYILDEVDAALDLSHTQNIGRMIKSHFPHSQFIV
VSLKEGMFNNANVLFRTKFVDGVSTVQRTVTKQQSK
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgcacattaaggagatctgtctcgaggggttcaaatcctacgcaacgagaaccgtggtt
ccgggcttcgacccgtatttcaacgctataacaggcctcaacggctccggcaaatcaaac
atccttgattcgatatgctttgtgctgggaatcaccaatttgcaacaggtcagggcttct
aatttgcaggagctggtgtacaagcagggccaagctggaatcaccaaggccactgtgtcg
attgtttttgacaactctgaccgcagtcgtagccctcttggctacgaggattctcctgaa
attacagtaactcgtcagattgttgttggtggaaggaacaagtatttgatcaatgggcat
ctggctcagcctagtcgagttcagaatctattccactcagttcagctgaatgtaaataat
ccacactttcttataatgcaagggcgtattactaaagtcttgaacatgaaacctcctgaa
acattgtcaatgctcgaagaagctgctgggacaagaatgtacgagacgaagaaagaggct
gcccttaaaacacttgaaaagaagcagagcaaggttgatgagatcgacaagcttctggac
caggaaatactcccagctctgcaaaaattgagaaaagagaggatgcagtacatgcaatgg
gccaatggtaatgctgaattggacagacttaagagatattgtattgcttatgaatacgtg
caagcggaaaaaaatagggataacactgtccaaggtgttcaagccataagagataagatg
ctggagattgattcaactgttggaaaattgcatgaggaaacacaggaaatggagacgcaa
atatcaaaactgattgctgaaaaggaagcaagcatgggtggcgagctaaagatattgtca
gaaaaagttgatgtactttcacgtgatctggtgaaagaaacctctgcattccaaagccaa
gaagataatcttaaaactgagaaagatagcgtagccaagattgagaggaaccttcaagaa
tcaaaactagcagctgaagagaaagctacggctataaaaactgctgaagacggagcttct
gatcttaaaataaattttcagaagctttcaaatagtttggatgagcatcagaaagaattc
caaggtgtcatggcaggtaagagcagtggaaatgatgagaagtgcctcgaagaccaattg
ggagatgccaagaaagctgtaggaaagtcagagacagaactgaagcagctgcaaaatcag
ataaaccatgttgacaaagagctgaaggagaaaaaaactcaattagtgtctacatctgca
aaagctgctgctattgagaatgagcttaatgtcaagaggaaagaagttgtaacagttgaa
aaggaactcgaatctctttcttatgatgatacccttatggagtcactccaaaaggatcgg
atgattgagtcagagacggtgcagaaacttgaaaggaaagcacgtgaggtttcttcaaga
ttgggtagggttgaattcaattaccgtgatccagaaaataattttgatcggtcaagggtg
aaaggtgtggtcgcaaaactaattaaagtaaaggatggctctgcagcggttgccttagag
gtagctgctggtggcaagctgtttaatgttgttgtagacacagaaaatactggaaaacaa
cttcttcagaagggtggtctgcaaaggagagtcacaattattcctttaaacaagatccag
agccaccccgtctcaaagcgaatccaagatgctgctgttaaattggtaggccaaggtaat
gccgcagtggcactttctttggttggatatgaccacgaacttcaaagtgccatggaatat
gtgtttggatcaacatttgtttgcaaatcaattgatgctgcaagagaggtagccttcacg
agagaaacagcaacccccagtgttactctggaaggtgatattttccaacctagtggactt
ttgactggtggtagtcgcaaaggtggaggtgaactgttgatgcagcttcatgctttggca
gaagttgaattggaactctctactcatctaaagcgactgtcagatattgaagctaagatc
aatgagcttcttcctcatcaaagagtgtttgaaaaccttaagaaagatttggtactcaag
tcgcatgagctcaggctcttagaggaaagggctaaacaaactgagcaccatcagctcagg
gagtgggtacagagtacagaggagaagctagccgaagcaaaatcagcaattatagacaag
aaagttctgtatgatgaatgtgtgaccagagtgtcatcccttgagaagtcgatccatgac
catgctggaaacagggagagtaggcttaaggatttagagaagaagatcaaggctatcaaa
acccagatgcaggcagcttcagagaacctcaggcgacatgagactgacagagagcggctt
ataatggagatggaagcaaataagaaagaatgcttatcactggagagccaattagaagct
ttgaataagcacattgaggatcttagttccgaactggattctcagagaaccaagatttct
tctattaaaaaatctcgtgatgaggtccaagctgagcacaacatggccagtaggaagatc
aaggaatgtgattcacaaataagtggtattgtcaagaagcaaaaggatatccagcaaaaa
attagtgaattcaatctagagaggaaaagaatggaaaatgaggtcaaacgcatggagatg
gatcagaaagattgtgcaatgaaggttgataaaatgattgaaaagcatgcatggattgca
tctgagaagcaactttttggacgagctggatcagattatgattttgggtcccgcgatccc
cttaaggctagggaagactttgagaaactgcaagctgagcaatctggtctagagaaaagg
gtgaataagaaggtcatggccatgtttgaaaaagctgaagatgagtacaatgatttgcta
tctaaaaagaacataatcgagaatgacaagtcaaaaatcaaaatggttattgaagagctt
gatgagaagaagaaggagacgctcaaggttacttggaataaagttaacaaagattttggt
tcaatattttctactctcttgcctggcacaatggccaagctggagcctccagaaggaggc
agcttcctcgatggcttggaagttcgagttgcttttgggagtgtctggaaacagtctttg
tctgaactcagtgggggacagagatctttactcgcgctttctttaatcttggctttgctt
ctttttaaaccagctccattatatatattggacgaggttgatgcagctcttgatttaagc
cacacacagaacataggaagaatgatcaaatctcactttccacactctcagttcattgta
gtctccttgaaagaaggcatgtttaacaatgccaacgttcttttccggacaaaatttgta
gatggtgtttccactgttcagagaactgtgacgaaacagcaaagcaagtaa
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