KEGG   Salvia hispanica (chia): 125192549
Entry
125192549         CDS       T09851                                 
Name
(RefSeq) SART-1 family protein DOT2
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
shis  Salvia hispanica (chia)
Pathway
shis03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:shis00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125192549
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:shis03041]
    125192549
   04121 Ubiquitin system [BR:shis04121]
    125192549
Spliceosome [BR:shis03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    125192549
 Complex C
   U4/U6.U5 tri-SnRNP specific factors
    125192549
Ubiquitin system [BR:shis04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    125192549
SSDB
Motif
Pfam: SART-1
Other DBs
NCBI-GeneID: 125192549
NCBI-ProteinID: XP_047946113
LinkDB
Position
6:complement(2770815..2777113)
AA seq 928 aa
MGVDLTDPTHRRSVERRDGGDNMRERWTGDYGGMGENESDEALESGKNRGKEKSKSSGRR
EEKDHRSRDRERSKVLDNSKENKESEKDRSSTRDRRKEDRDEREKDKIRDKGREQDTERD
KHKEKEKDKERRDRIKEKEREREREKEAEKDAERGRDKEKVKEKSRDKDRDKEKEKDRSK
DKEREKHKDREREREFARHRGKDTAEREKGKERDREKEKLAEQEKDRASDRDKSSRKQKD
ESKDGQSRFENDYSHNQTSKHQVDNSDAKSGAKSLDQTEKADNRESTSKLEQRISKMKEE
RLMKTSEGASDILSWVNKSRKIEEKRNTEKEKALQLSRIFEEQDNMNDEGSDDESGTQDI
AQHLGGVKVLHGLDKVLEGGAVVLTLKDQSILADGDINEEVDMLENVEIGEQKRRDEAYR
DSKKKVGVYDDKFNDEVGVEKKMLPQYDDPIADEGLTLDSSGRFSGEAERKLEELRRRIQ
GVSASNHGEDLNPIGKTSTDYYTQEEMAKFKKPKKKKSLRKKDKLDINALEAEAIASGLG
VEDLGSRKDGRRQIRKEEEDRIEAETRSNAYQSALAKADEASKSLRQEQGVTMQTEEEDA
PAFGDDDDELRKSLERARKIALQKQNGTEKSGSVVIKLLASRDANVSASDNPNESSGDQP
ENKVTFTEMDEFVWSLQLNEEEKKPASEDAVFMEEDVAPSTSDHEMMDEDGGLTDVQEPT
PDETHTEEKEEEVAPDETIHEQAVGKGLGGALQLLKNRGTLKETIEWGGRNMDKKKSKLV
GIVGGDGTKDINIERLDEYGRILTPKEAFRLLSHKFHGKGPGKMKQEKRMRQYQEELKIK
QMKNADTPSLSVSRMREAQAQLKAPYLVLSGNVKPGQSSDPRSGYATVETDLGGGLTPML
GDKKVEHFLNIKRKPEHGDTPSPKKPKK
NT seq 2787 nt   +upstreamnt  +downstreamnt
atgggggtggatttaactgatcccacgcaccgcagaagtgttgaaagacgtgatggaggt
gacaatatgagggagagatggacaggagactatggtggtatgggggaaaatgaatctgac
gaagcactagagtctggcaagaaccgtggcaaagagaagagcaaaagcagtggccgtagg
gaggagaaagatcacaggagtagggatcgagaaaggtcaaaggtcctggacaatagtaag
gaaaataaagaatctgagaaagatcgatcatccactagggataggaggaaagaggacagg
gatgagagggagaaagataaaattcgtgataagggccgagagcaggatactgaacgagac
aagcacaaagaaaaagagaaagacaaagagcgaagggaccgtataaaggaaaaggaacgg
gaacgtgaaagggaaaaggaagcggagaaggacgccgaaagaggacgggataaagaaaaa
gtaaaagagaagagccgagataaggatagagacaaggagaaggaaaaagatagatcaaag
gataaggagcgagaaaagcacaaagatagggagagggaaagggaatttgctagacataga
ggtaaagatacagctgagagagagaaggggaaggagagagacagagagaaggaaaagctg
gcagagcaagagaaggatagggcaagtgacagagataaaagtagtcgaaaacagaaggac
gagagcaaggatggccaatctagatttgagaatgattatagtcacaatcaaactagtaag
caccaagttgataactctgatgccaagagtggtgccaaaagtcttgaccaaactgagaag
gctgataatcgtgaatcaacatctaagttagagcagcgtatttctaaaatgaaagaagaa
aggttgatgaagacgtctgaaggtgcttctgatattttgtcttgggttaataagagcagg
aagattgaagagaaaaggaatactgagaaggagaaagcattgcagctttcaagaattttt
gaggagcaggataatatgaatgatgaaggaagtgatgatgaatcaggaactcaagacata
gcacaacacttgggtggagtcaaagttctccatggactggacaaagtacttgaagggggt
gcagttgtgctaactctcaaagatcaaagcatactcgctgatggagacatcaatgaagag
gttgatatgcttgaaaatgtggagattggagagcaaaagcgaagggacgaggcttataga
gattcaaagaaaaaagttggtgtttatgatgacaagttcaatgatgaagtgggtgtagag
aaaaaaatgcttccacaatatgatgatcctatcgctgatgaggggttaactcttgattcg
agtggaaggttttctggtgaagctgaaaggaaattggaagagctccgaagaagaattcaa
ggagtgtctgcaagcaatcatggtgaagatctgaatccaattgggaagacatcaacagat
tattatacccaagaagaaatggccaaatttaagaagccaaagaaaaagaagtctttgagg
aagaaggataagctggacataaatgcccttgaagctgaggctatagcttctggactgggt
gttgaggatcttggttctaggaaagatgggagacgacagattcgtaaggaggaagaggat
agaattgaggctgaaacgaggagcaatgcttaccaatcagcattagctaaagcagatgag
gcatctaagtctctccggcaagagcaaggggttaccatgcagacagaggaagaagatgca
cctgcttttggtgatgatgatgatgaactccggaaatcattggaaagagcgagaaaaata
gccttgcaaaaacaaaatggaacagaaaaatctggctccgtggttattaagctcctagcc
tctcgtgatgccaatgtgtcagcttctgacaatccaaatgaaagttctggggatcaacca
gagaataaggttaccttcacagagatggacgagtttgtttggagcctacaacttaatgaa
gaagagaaaaaacctgcaagtgaagatgccgtcttcatggaggaagatgtggcacccagc
acatctgatcatgaaatgatggatgaagatggtggcttgactgatgtacaagagcccact
ccagatgagacccacacagaggaaaaagaagaggaggtggctccagatgagacaattcat
gaacaggcagttggtaagggtctaggaggtgcgcttcaacttttgaaaaatcgtgggact
ctcaaggaaactattgaatggggtgggcgaaacatggataagaagaaaagcaaacttgtt
ggcatagtaggtggagatggaactaaggatataaatattgagcgattagatgaatatggc
cggattttgacaccaaaagaagcttttcgtctactctcgcacaagttccacgggaaaggc
cctggaaagatgaaacaagaaaagcgaatgcggcagtatcaggaagagttgaaaataaag
cagatgaaaaatgctgatacaccatcactttcagtttcaagaatgagggaagctcaagct
cagcttaaagctccttatcttgtcttaagcggcaatgtcaaaccagggcaaagtagcgat
ccacggagtggttatgcaactgtagagacagacctgggtgggggcttgacacccatgctt
ggtgataaaaaggttgaacacttcttgaatatcaaacgcaagcccgagcatggagacact
ccttctccaaagaagcccaaaaagtga

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