Salvia hispanica (chia): 125192735
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Entry
125192735 CDS
T09851
Name
(RefSeq) transmembrane E3 ubiquitin-protein ligase FLY2-like
KO
K23788
transmembrane E3 ubiquitin-protein ligase [EC:
2.3.2.27
]
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shis04121
]
125192735
Enzymes [BR:
shis01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125192735
Ubiquitin system [BR:
shis04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125192735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-RING_11
zf-RING_5
zf-C3HC4_3
zf-C3HC4
DUF2921
PHD_NSD
zf-ANAPC11
zf-RING_16
zf_RING_Vps8
zf-P11
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
125192735
NCBI-ProteinID:
XP_047946322
LinkDB
All DBs
Position
6:47438064..47443157
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AA seq
558 aa
AA seq
DB search
MGVMESWKFWGVLLRIGFGVLVVTWPVSGLRPLRQRRPWGEEWLPIGKEKQELGPFSSWN
ITGTYRGSWNFPDSANSSSKFADFRKSSGNSVLELISTPTKITGVHYVQGVIIFHDVFDN
ENDVRGSQIRVEGVYIWPFRQLRMVANSGKESEFGQEDDYLLSNPYHLLGVFSSQVFQES
PREKIWKRKHSPIYEMEKHCNIEISAQISRLSSRNNGGDQDKYYLEGLMESPSVDDDVDC
FSPMLLNATSVNVEVYYNKAVNYTLMVTFISFLEVLLLIRQMEHSNTQSGAAKVSLVMIG
HQAIMDAYLCLLHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKANRPSINGE
NWEAMRRELSVLYSRFYGILLGGILVMYEFHNFLRIILLLLHSFWIPQIVINVVRDSRKP
LHPHYILGMTLTRISIPLYVFGCPHNFMRIEPDGTWCICLALFMGLQVFVLLLQHYLGSR
WFIPRQILPEKYSYYRRFLQGSNHATDCVICMTTIDLSQRSNDCMVTPCDHFFHGSCLQR
WMDIKMECPTCRRPLPPA
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtgatggaaagttggaaattttggggggttttgcttcggattgggtttggggtt
ttagtggtgacgtggcctgtgagtggtttgaggcctttgaggcagagaaggccttggggt
gaagagtggcttcctataggtaaggaaaagcaagaattgggaccgttttcttcttggaat
ataacagggacctatagagggagctggaactttccagattccgcaaatagctcttccaag
tttgctgattttaggaagtcgagtggcaattcagtactagaactaatcagtacaccaaca
aaaataacgggtgtacactatgtgcagggagttataattttccatgacgtgtttgacaac
gagaatgatgttcgcggatctcaaatcagggtagagggtgtgtatatatggcctttccga
caactaaggatggtggctaacagcggaaaagagagtgagtttgggcaggaagatgattat
ttattgtcgaacccgtatcacttgctcggagttttctcgtcccaggtgtttcaggaatct
ccgcgagaaaaaatctggaagaggaaacattccccaatttacgaaatggagaaacactgc
aacattgaaatctctgcgcaaatttcacgattgtcttctagaaataatggtggagatcaa
gataagtattatctagaaggactaatggagagcccttcagtggatgacgacgttgattgc
ttctcgcccatgctcctaaatgcgacttctgtcaacgtcgaggtctactataacaaagca
gttaactacactttgatggtcacctttatatctttcctcgaagttctgttgttgatccgg
caaatggaacacagcaacacccaatcaggggctgccaaagtttcgcttgtgatgatcggt
catcaggcaataatggatgcttatctctgccttctgcatctcacggccggaattttagtc
gaatctctatttaacgcttttgcaactgccgcgtttttcaaattcgtcgtcttctcaata
ttcgaaatgcggtacctacttgcaatatggaaggcgaacaggccatcaatcaacggagag
aattgggaggcgatgaggcgcgagctctccgttctttacagccgtttttacgggatcctc
ttgggcggcattcttgttatgtacgagtttcacaattttctgcggatcatccttctcctc
ctccactcgttctggattccgcaaatagtgatcaacgtagttcgtgactcgaggaagcca
ttgcatcctcattacatcctagggatgactctaactcgaatttctattccgttatacgta
ttcggctgcccacataatttcatgcgaatagagcccgatggaacgtggtgcatctgttta
gccctttttatgggactgcaagtcttcgttcttctcctccagcattacctcggatcccgt
tggttcattcctcgccagattttaccggagaaatatagctactataggcgattcctgcaa
gggtcgaaccacgccacggattgtgtcatttgcatgaccaccatcgacctcagccagcgc
tcgaacgattgcatggtgacgccgtgcgatcatttctttcacggcagctgtttgcagaga
tggatggacataaaaatggaatgcccaacctgccgccgtccccttccgcctgcttag
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