Salvia hispanica (chia): 125193078
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Entry
125193078 CDS
T09851
Name
(RefSeq) long chain acyl-CoA synthetase 6, peroxisomal-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis00061
Fatty acid biosynthesis
shis00071
Fatty acid degradation
shis01100
Metabolic pathways
shis01212
Fatty acid metabolism
shis04146
Peroxisome
Module
shis_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
125193078
00071 Fatty acid degradation
125193078
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
125193078
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
shis01004
]
125193078
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shis04147
]
125193078
Enzymes [BR:
shis01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
125193078
Lipid biosynthesis proteins [BR:
shis01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
125193078
Exosome [BR:
shis04147
]
Exosomal proteins
Exosomal proteins of breast milk
125193078
Exosomal proteins of breast cancer cells
125193078
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
125193078
NCBI-ProteinID:
XP_047946756
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Position
6:7820022..7825074
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AA seq
687 aa
AA seq
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MDSRAHRRLHKLTSHLINSTAGSDQPLHLRHHPTAGEFVSEQGYSVVLPEKLQTGEWNVY
RNRRSPFKLVSRFPDHPDIATLHDNFVYAVKTFRDHKYLGTRFQEDGTVGEYRWMTYGEA
GISRSAIGSSLVRRQIQKGSCAGLYFVNRPEWVVIDHACSAYSFVSVPLYDTLGPEAVRY
IVNHAAVRAIFCDTKTLNILLRFLPEIPSVHLIVVVGGVEGEMASLSSTTGVEIISYSQL
HSEGLSSFEPFRPPTSDDIATICYTSGTTGTPKGVVLSHGNLIANVAGSRMGFKLYPSDL
FISYLPLAHIYERVTQITVAYIGGASGFFQGDSMKLLEDVAVLKPTIFCSVPRLYNRIYA
GVMNSVKSSGDLRERLFDAAYKAKKQSLYTGKKPPPMFESLVFEDIKRILGGRVRYMVSG
ASPLSPQVMEFLRVCFGCTVIEGYGMTEASCVISNMDETDVLSGHVGVPHPSCEMKLVDV
PEMNYTSKDQPHPRGEICVRGPTVFQGYYKAEELTREAIDEDGWLHTGDIGSWLPQGRLK
IIDRKKNIFKLAQGEYIAPEKIENVYTKCKFIAQCFVHGNSLKSSLVAIIAVDHDALKTW
AATEGIEYEDLKQLCCDPRTKGAVLADMDSIAREAQLRGFEFAKDVALVLEPFTLENGLL
TPTFKIKRPQAKAHFAKEIDEMYAHLA
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggattcccgtgcccatcgccgtctccacaaacttactagtcatctcattaactctacc
gccggcagtgatcagccgttgcatctccgccaccaccccacagccggtgaatttgtttct
gagcaaggatacagtgttgtgcttccagagaagctgcagactggggaatggaatgtctac
agaaatcgacgatcgcctttcaagcttgttagtagatttcctgatcatcctgatatcgca
actttgcacgataattttgtgtatgcagttaagacatttcgggatcacaagtacttagga
acgcgatttcaagaagatggaacagtgggagagtacagatggatgacttatggggaagca
ggcatttcgcggtcagctattggttctagcctcgtgagacgtcagatacaaaagggatct
tgtgccgggctttattttgttaatagacccgaatgggttgtgattgatcatgcctgctct
gcgtattcatttgtctctgtacctttatacgacacattaggtccagaagcagttagatac
attgtcaatcatgcagctgttcgagctatattttgtgatacaaaaacattaaatattctg
ctcaggtttctgcctgagatcccatcagtacatctgattgtggttgttggaggagtagaa
ggtgaaatggcatcactttcttcaacaacaggagtagaaataatctcatattcacaacta
catagtgaaggtcttagcagctttgagcctttccgtccaccaacatccgacgatattgcc
acaatatgctatactagtggcacaaccggaactccaaagggagtcgtgttgtctcatgga
aatttgattgccaatgttgctggttcgagaatgggattcaagttatatccatctgatctt
ttcatatcatatcttcctctggcacacatatacgagcgcgttacccaaatcacggtcgcg
tatattggaggtgcttctggtttttttcaaggggacagcatgaaattactcgaggatgtc
gctgttttgaaaccgactatattttgcagtgtcccacggctgtataatcggatatacgca
ggagtgatgaactctgtaaaatcatccggtgatttgagggagaggctgtttgatgcagct
tataaagctaagaagcagtcgttatataccggaaagaaacctcctccaatgtttgagagt
ttggtgtttgaggatattaagagaatactgggaggcagagttcgttacatggtgtctggc
gcgtcacccttgtctcctcaagtcatggaatttctacgagtatgctttggttgcacagtt
attgaaggatatggaatgacagaggcttcttgtgtcataagcaacatggatgaaaccgat
gttttatccggccatgttggtgttccccatccttcttgtgagatgaagctcgtagatgtt
ccggagatgaactatacatccaaggaccagcctcatccacggggtgagatctgcgtgaga
ggtcccactgtgttccaaggatactataaagcggaggaactaactagggaagcaatcgat
gaggatggatggcttcacaccggagatataggctcatggttgccacaaggccgattgaag
atcatcgataggaaaaagaacatattcaaattggctcaaggagagtacatagctcctgag
aaaatagagaatgtatacacaaaatgcaagttcattgcacaatgctttgtacatggcaac
agcctgaagtcttctctagtcgcaattattgctgtggatcatgatgccttgaaaacatgg
gctgctactgaaggcattgagtatgaagatttgaagcagctatgctgtgatcctcggacg
aagggtgccgtgctggctgacatggactccatagcaagggaagctcaactgagaggcttt
gagtttgcaaaagatgttgctcttgtgcttgaaccattcactttggagaatggattgctc
actccaacatttaagatcaagaggccacaagccaaagctcactttgctaaagagatcgat
gaaatgtacgcgcacttggcttga
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