Salvia hispanica (chia): 125193507
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Entry
125193507 CDS
T09851
Name
(RefSeq) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shis03400
]
125193507
Enzymes [BR:
shis01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
125193507
DNA repair and recombination proteins [BR:
shis03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
125193507
Prokaryotic type
125193507
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
NNH2
Motif
Other DBs
NCBI-GeneID:
125193507
NCBI-ProteinID:
XP_047947273
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Position
6:complement(70232..73200)
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AA seq
489 aa
AA seq
DB search
MSSSIPPVQPGRIRILKQGSHRNSAGPVVYWMFRDQRLRDNWALIHAIHQANQLQAPLAI
AFNLFHQFKGAKARHLGFMLRGLRKLHSDLRSTLDIPFFLFQGEAVDTIPDFLKESRASL
LVTDFSPLREVRQWKEEICKRVTESVSIHEVDAHNVVPIWVASDKLEYAARTLRGKINKK
LPEYLIDFPELTSPMKKWDSSGNSIEWEDLIVSIVRQGAEVPELEWCEPGEKAALEVLMG
DKSGFLKARLKNYSSDRNNPLKPKALSGLSPYLHFGQISAQRCALEAEKVRKLYTKAVDV
FLEELIVRRELADNFCFYQPHYDSLEGAWEWARKTLMDHASDKREHIYTREQLEKAQTAD
PLWNASQLEMVHYGKMHGFMRMYWAKKILEWTSGPEEALATSIYLNDKYQIDGRDPNGYV
GCMWSICGVHDQGWRERPVFGKIRYMNYAGCKRKFDVEGYIAYIKRIVGECKKRKAEALP
NTKAKQLHT
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcctcgataccgccagttcagcccggcaggatccggatcctgaagcaagggtcc
caccggaactcggccgggccggtggtgtactggatgttccgggatcaacggctgagggac
aactgggctctgatccacgccatccatcaggctaatcagctgcaggcgcccctcgccatc
gctttcaacctcttccatcagttcaagggcgccaaagctcgccacttaggctttatgctc
agaggcctcaggaaattgcattcggatctccgctccacgctcgacatcccctttttcttg
ttccagggagaagctgttgacacaattccagattttctgaaagaatcccgggcttcgctt
ttggtaacagacttctcaccactgagggaggttaggcagtggaaagaggaaatctgcaag
agggtaactgagtcagtttctattcatgaagttgacgcgcacaatgtggtgcctatttgg
gtggcatcggacaaattggaatacgctgccagaactctaaggggcaagataaacaaaaag
cttcctgaatatctaattgatttccctgaactcacgagtccaatgaaaaaatgggactcc
tcgggtaattcaattgaatgggaggacctcattgttagtattgtaaggcaaggtgcagaa
gttcctgaacttgaatggtgtgagccaggtgaaaaggcagctctcgaagtactaatgggg
gacaagagtggatttctgaaagcaagattgaagaactattcttcggacagaaacaatccg
ctgaaacccaaagcactatccggcctctctccttatttgcattttgggcagatatcagct
cagagatgtgcattagaggcagaaaaagtacggaaattatacaccaaggcagttgatgtg
tttctggaagaattaattgtccgcagagaacttgctgataacttctgcttctaccaacca
cattatgattctctagaaggtgcttgggagtgggctcgcaagactttaatggaccatgcc
tctgataaacgagaacacatatacacgagagagcagttggagaaagcacaaacagctgat
ccactttggaatgcttctcagttagaaatggttcattatggaaagatgcatggttttatg
aggatgtattgggcaaaaaagattcttgaatggactagtggaccagaagaagcactagca
acatcaatatacttgaatgataaatatcaaatagacggcagggatccaaatggatacgtc
gggtgcatgtggtcaatatgtggagtgcatgatcaggggtggcgagagcgaccagttttt
ggaaaaattcggtacatgaactatgccggttgcaagagaaaatttgatgtggaaggatac
attgcgtatataaagaggatagtcggcgaatgcaagaaaaggaaggcagaagctctccct
aacaccaaagcaaaacaactgcacacctaa
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