Salvia hispanica (chia): 125193672
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Entry
125193672 CDS
T09851
Name
(RefSeq) eukaryotic translation initiation factor 4G-like isoform X1
KO
K03260
translation initiation factor 4G
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shis03019
]
125193672
03012 Translation factors [BR:
shis03012
]
125193672
Messenger RNA biogenesis [BR:
shis03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
125193672
mRNA cycle factors
Stress granule specific factors
125193672
Translation factors [BR:
shis03012
]
Eukaryotic type
Initiation factors
eIF-4
125193672
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
A2M
Motif
Other DBs
NCBI-GeneID:
125193672
NCBI-ProteinID:
XP_047947470
LinkDB
All DBs
Position
6:complement(39127279..39135102)
Genome browser
AA seq
1696 aa
AA seq
DB search
MNQNQSRAERCDSVQYRRTGRSGSSNQQRHYSGGVSIKGGGGASSASTNLSNRSFKKYNN
NEPVAQQGAGPWNVDSGDSSAVHAVNNGAHQLQPAQTVPEASLKTTRPVPKSPSSNVSLA
AAPSNVSSDSKAPATPGEISGDASKSYPLQFGSIGTVIANVMQIPARTSSAPPNLDEQKK
DQARYESSRTDPALPTPSIHKQHFHKKDAGIRDQPNSGEAHLASRPKRDGQVSAAQPGIQ
TQRPALHPIPKIPMQFPFHQQQINVQFGGPNPQMQSQALSGPMPIPMALPLGNPSVQHSM
FVQGIQPHPMQPQAMMHQGQGLNFSPQIGTQLPLQLGNMGMSLAPQFPQQAPVKYNGSRK
TVKITHPETHEELRLDSSPAPRLQPSAQSQSQPISSFPPNVPMNIHLSSYNAAPHFYPPA
SSVPLGSTHVPPNSHPPRLHNQVTVKSPIISHAEKDPLPLSGSLSVGKAEASKPSRLKAE
LPISSLSSSSQPKAGLGVSYVSVTSSSPVTVERDVPYSASGSTAMDVSVSVSTRSSDGSR
LGVSHPDSLKDMPKRPGSRGQQEQDLSPYTSLSNFPSQLPDVATTEAKHIPSESAKDPLL
TAVASSSEASSITGEGAIEEKSGNTIKGLGSVVIDSTQSEPEAIRGFEQAEAISAESSLE
NSMKSLTLESPEKIGKLKENPNKEIASINSGSSEHTREKSEQLSRYCSNDVEREGTLAVP
ADISGGEKLESSVPVTALNKNEIMASSTGVLVSPSPFSVKEKGSDANVAKGAAPKGKKKK
KELYRKAEAASTSSDLYMAYKGPEEKKETITNAKASEKPSSISEDKTSIGVSQENVAACE
KPALNKVEPDDWEDAAEISSPQLGTSRNENEDNDDGDGSTTKKYSRDFLLKFVELCTDLP
EGFEITSDIADSLIFSSFNLARESYPTPGRSVDRHIGGSRPDRRGSGLGDEDKWNKFPVP
PMWNDGGYMNNAVGFRPGQGGNNGVLRNPRAQTPQYAGGILSGPMQSLGPQGGLQRNNVD
SDRWHRGAGFPKDMMPYPQTPMQVMHKAENKYEVGKVSDEEEAKQRQLKGILNKLTPQNF
EKLFQQVKQVNIDNVITLSGVISQIFDKALMEPTFCEMYANFCFHLAAELPDLSVDNEKI
TFKRLLLNKCQEEFERGEREEEEANKVEEEGEVKQTAEEREEKRLRARRRMLGNIRLIGE
LYKKRMLTERIMHECINKLLGQYQNPDEENIEALCKLMSTIGGMIDHPKAKEHMDAYYNF
MAQLSNNMKLSSRVRFMLKDAIDLRKNKWQQRRKVEGPKKIEEVHRDAAQERAQVGRLGR
TPSMGNSSRRGPPMDFGARSPGMLSSPNSHISGFRGAPPQLRGYGSQDVRTDERHSSVPL
PQRPLGDDFITLGPQGGLARGMAFTGQPLAANVPSAEMQSLGDGWRMGHGQNGFSSIPER
AAYGQRQDLMPRHMQERFAAPPTFDQSHPQERNDHASDGSLPTSPSPQGGHPSIMNDVSS
DKVWPEEQLHDKSVAAIKEFYSARDEKEVALCVKDLNAPSFYPTMISLWVTDSFERKDME
RDLLTKLLINLSKLQDRVINEDQLIKGFESVLAVLEDAVNDAPRAGEFLGRIFGKIILEN
VISLSDIGRLIYEGGEEQGQLVESGVAANVLASIFDTIKSEKGDSVLDAVRSSSNLRVED
FRPPGSNKAFRIDKYI
NT seq
5091 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagaatcaatcaagggctgagaggtgcgattctgtacagtacaggagaaccggc
cgatccggcagctccaatcagcagcgtcactactccggtggcgtttccattaagggtggt
ggtggcgcctcctccgcctccaccaatctttctaatcgcagttttaagaagtataacaac
aatgaaccagtagcgcagcagggagcgggaccatggaatgtggattctggcgattcatct
gccgtacatgctgtaaataatggtgctcatcaactgcagccagctcaaacagtacctgaa
gcctctctaaagactacccgacctgttcctaaatctccatccagtaatgtttcgttggca
gctgcaccgtccaatgtttcatctgactccaaggccccagcgacacctggagaaatttca
ggagatgcatctaagtcgtatcccttgcagtttgggtccataggtactgttattgcgaat
gtaatgcagatacccgctcgaacaagctctgcaccaccaaatttggatgagcagaaaaaa
gatcaggcacgttatgaatcttcaaggacagatcctgctttgccaactccatcaatccac
aagcagcattttcacaaaaaggatgcaggaatccgtgaccaacctaattctggtgaagct
catttagcatctagacccaaaagggatggccaagtttcagctgcacaacctgggattcaa
actcagaggcctgcactacaccctatccctaaaatacccatgcaatttccattccaccaa
caacagataaatgttcagtttggtggtccgaatccacaaatgcagtctcaagccttgtca
gggccgatgccaattccaatggccctacctctaggaaatccatcagtccagcattcaatg
tttgttcaaggtatccagccacatccaatgcagcctcaagcaatgatgcatcagggacag
ggattaaatttttccccacaaattggtactcagctacctcttcaattgggtaacatgggg
atgagcttggccccacagtttcctcagcaagcacctgtaaaatacaatggttctcgcaaa
actgtgaagattactcatccagaaactcatgaagaattgaggcttgatagttcaccagct
ccaaggttacaacctagtgcgcaatctcagtcacagcctatttcttcatttcctcctaat
gtgccgatgaatattcatctcagttcttacaatgccgctccccacttttatcctcctgca
agttctgttccacttggtagcactcatgttcctcccaattctcacccgccaaggctccat
aaccaggtgactgtgaaatcacctattatctcgcatgcagagaaagatcctcttccactc
tcaggttctctttctgttgggaaagcagaggcttcaaagccttcaaggctaaaggccgaa
cttccaatttcttctttgagctctagttcacagccaaaggctggtttgggagtatcgtat
gtgtcagttacctcatcaagtcctgtgacagtggagagggatgtaccttattcggcttct
ggttcaactgccatggatgtttctgtatcagtatcaactagatcttctgatggttctaga
ttaggagtatcacaccctgactccctcaaggatatgcctaaaagaccaggcagtagaggc
cagcaggagcaggatctcagcccatatacttctctctcaaattttccttcacaactgcct
gatgttgcaacaactgaagcaaaacatataccatctgaaagtgccaaggatccattatta
acagctgtagcttcttcttctgaggcttctagcataacaggcgagggtgctatagaagaa
aagtctggaaatacaattaaaggtttaggatcggtagttatagatagcacacaatcagag
cctgaagctattaggggatttgagcaagcagaagcaatatcggctgaaagtagtttggaa
aactccatgaagtctcttactttggaatctcccgaaaagattggtaaacttaaggaaaac
cctaataaggaaatagcatccatcaatagtggctcatcagaacatacacgtgaaaagtca
gaacagttatcaaggtattgttccaatgatgttgagagggaaggtactttagcagtgcct
gctgacatatctggtggagaaaaacttgagagttctgtgccagtaactgcattaaacaaa
aatgaaattatggctagtagtacaggtgtcttagtttctccatctccattcagtgtcaaa
gaaaaaggttcagatgcaaatgttgcaaaaggtgctgcacccaagggtaagaagaagaaa
aaagagctttatagaaaagcagaagctgctagtacaagttctgatctttatatggcatac
aagggtcctgaagagaaaaaggagactataactaatgcaaaggcctcagagaagccttca
agtattagcgaggacaaaacatctattggtgtatctcaggagaatgttgcggcatgtgaa
aaacctgctttaaataaagttgagccagatgattgggaagatgctgctgagatttcttct
ccacagttaggaacttcaagaaatgaaaatgaagataatgatgatggtgatggatcgaca
actaaaaagtactccagggactttctcctcaagtttgtggagctatgcactgatcttcca
gaaggttttgagattacatcagacattgcagatagtctgattttttctagtttcaatctt
gcacgtgaatcataccctactcctggacgcagtgttgacaggcatatcggaggctctaga
ccagatcgtcggggaagtggcttgggagacgaggacaagtggaataaattccctgtgcct
cctatgtggaatgatggtggttatatgaataatgctgttgggtttcgacctggtcaagga
ggtaataatggtgttctaaggaatcctcgggcacagacacctcaatatgctgggggcatc
ctctccggaccaatgcagtcccttggtcctcagggtggcctacaaagaaataatgttgat
tctgataggtggcatcgtggagctgggtttccgaaagatatgatgccttatcctcaaaca
cctatgcaggtgatgcacaaagctgaaaataagtatgaggtaggtaaggtttctgatgag
gaagaagccaagcagaggcaattgaagggcatcttaaacaaacttacccctcaaaacttt
gaaaagctgtttcaacaagttaagcaagtcaacattgacaatgttatcacactgtctgga
gtgatctcacagatttttgataaggctttgatggagcccaccttctgtgagatgtacgcc
aacttctgctttcaccttgctgcagaactaccggatcttagtgtggacaatgaaaaaatt
acttttaagagattactcctaaacaaatgccaggaggaatttgaaaggggagaaagagag
gaagaagaggcaaataaagttgaagaagaaggtgaagttaaacagacagcagaagagaga
gaggagaaaagactccgtgctcgaagacgtatgctagggaacattagactcattggagaa
ctttacaagaagagaatgttgactgagaggataatgcatgagtgcataaataagttgctg
ggtcaatatcagaatcccgacgaggaaaacatcgaggctttgtgcaaattgatgagtaca
attggagggatgattgatcacccaaaagcgaaagaacatatggatgcctattacaatttc
atggcacagttatccaataatatgaagctttcatcgagggtcagatttatgcttaaagat
gctattgatctaaggaagaataagtggcagcaaagaagaaaagttgaaggtccgaaaaag
attgaggaggtacatcgagatgctgctcaggagcgtgcacaagttggtagattgggtcgc
actccaagcatgggtaattcttctagaaggggtcctcctatggattttggtgcaaggtct
cctggtatgttatcctcgccaaattcccatattagtggtttccgcggtgccccaccacag
ctacgaggttatggttcccaggatgtgaggacagatgagagacattcgtccgttcctttg
ccccaaagaccactcggtgatgatttcattactcttgggccccaaggtggtcttgcaaga
ggaatggctttcacagggcagccattggcagccaatgttccttccgctgagatgcaaagt
cttggagatggatggaggatgggacatggccagaatggctttagttctatccctgaaaga
gcagcttatggccaaagacaggatctaatgccaaggcatatgcaagaaagatttgctgcg
ccaccaacttttgatcaatctcatcctcaagagcgaaatgatcatgcttctgatggatct
ctacctacttctccttctcctcaaggtggccatcctagtattatgaatgatgtgtcttca
gataaggtgtggccagaagagcaattgcacgacaagtcagttgctgcaatcaaagaattc
tacagtgcaagggatgagaaggaagttgctttgtgcgtcaaggatttgaatgctcccagt
ttttatccaactatgatctccctatgggttactgactcttttgagaggaaagacatggaa
agggacctactaacgaagcttctaataaacctctcgaaacttcaagatagggtgataaat
gaagatcaactcatcaaagggttcgaatcagtacttgcagtcctagaggatgcagtgaac
gatgcccccagagcaggagagttccttggtcgaatattcggcaaaattatacttgagaat
gtaatctcactttctgatatcggtcggttgatatatgaaggtggagaagagcaagggcag
cttgtagaatcaggggttgcagccaatgtccttgcaagtatcttcgacacaatcaaatca
gaaaaaggtgactctgtactagatgcggtgcgttcgagctctaatctgcgggtggaggac
ttcaggcctcctggctctaacaaagcatttagaatagacaagtacatttag
DBGET
integrated database retrieval system
