Salvia hispanica (chia): 125193762
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Entry
125193762 CDS
T09851
Name
(RefSeq) transcription factor IIIB 60 kDa subunit-like
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shis03021
]
125193762
Transcription machinery [BR:
shis03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
125193762
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
BRF2-like_C_cyclin_rpt
Motif
Other DBs
NCBI-GeneID:
125193762
NCBI-ProteinID:
XP_047947590
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Position
6:27879020..27889062
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AA seq
613 aa
AA seq
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MVRIWCPFCAVNVRTDTAEGKTCCSLCGRVLSEDNFTEEVQFTKSSDGQARMQGRFVASV
QSHSESRERTLNEAYNGINDIMYALEIDGGDYIASAALRLYKLALDKNFTKGRRKEQVQA
SCLYIVCRAKDKPFLLIDFSEHLRINVYVLGAVFLQLCKVLSLEETGLLQKLVDPSLFIH
RFADRLFRSKDQRISKTALQIVASMKRDWMQSGRKPSGICGAALYISALAHGLNCSKSDV
IKTVHICEATLTKRMIEFENTESGGLTIEEFEKKSEELAALENNVEDKFQMKSRNGELLC
SHKGDGKPQFAYGLCKDCYKEFMAISGGLNGGSEPPAFQRAERKRIMAEEAAADRSENLD
SSALLGLTETNSKHLNYDGQRSLKNTQDGATQPADPDLTGATLKPKTMHDTIDGRTDASD
FPLEESESLSDIDDFEVDVYINTEEEKNLKTTVWEEINREYLEEQKAKEAAAVAAKKAYE
ASFANCSGDVEGARKLAEAAAAAAAQIRKEKRQKRAADLKNLGPPETAKDAFKQMLNGKP
WSSKIRYELLEQLIDSDEQSPKKSRNETEAEAETKAETDHGDDYVEEDPEIDGTEDNTEE
YNCDQDINDLDEF
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggtgcggatatggtgtcctttctgtgccgtcaacgttcggactgataccgctgaagga
aaaacttgctgttcactttgtggaagggttctatctgaagacaacttcacagaggaagtt
cagtttacgaaatcatctgatggacaggcacgcatgcaaggtcgttttgtggcgtctgtc
caatctcattcagagagtcgtgagaggacattgaatgaagcttacaatggaataaatgat
ataatgtatgccttggaaattgacggtggtgattacatagctagtgcagcattacggttg
tataagttggcactagataagaacttcacaaaagggcgcaggaaagaacaagtgcaagct
tcttgtctttatattgtctgtagggctaaagataagccatttcttcttattgatttctca
gaacatctaaggataaatgtctatgtactaggggcagtctttttgcagctctgcaaagtt
cttagccttgaagaaactggtcttttgcaaaagcttgtggatcccagccttttcattcac
cgatttgctgatcgtctgtttagaagcaaggaccaacgtatttccaaaactgcacttcag
attgtggctagcatgaagcgtgactggatgcagagtggaaggaaaccaagtgggatatgt
ggagctgcactttatatatctgctctagcacatggtcttaattgttccaaatctgatgtt
attaagacggtccacatatgtgaagcaacattgacaaagcggatgattgaatttgagaat
accgagtcaggaggtctaacgattgaggagtttgagaagaagtcagaggaacttgccgct
ctggaaaataatgttgaagacaaatttcaaatgaagtctaggaatggtgagcttctatgt
agtcataagggtgatgggaaacctcagtttgcttatggtctttgtaaggactgctacaag
gagttcatggcaatttctggaggccttaatggtggatcagagcccccagctttccagcgt
gctgagaggaaaagaataatggccgaggaagctgctgctgatagatctgagaatctagat
tcatcagcattgcttggactgactgagaccaacagcaaacatttaaattatgatggacaa
aggagcctcaagaatactcaagatggagctacacagccagcagatcctgatttaacagga
gccaccttgaagccgaaaaccatgcatgatactattgatggcagaacggatgctagtgat
tttcctttggaagagtcagagagtttatcggacattgatgactttgaggtggatgtgtat
attaatactgaggaggagaagaatttgaaaacgactgtatgggaggagattaacagggaa
tatcttgaggagcagaaagcaaaagaagctgctgcagtagctgcaaagaaagcttatgaa
gccagttttgctaactgctcgggtgatgttgaaggcgcaagaaagctcgctgaggcagct
gcagcagcagctgcacagattagaaaggaaaaacgacagaagcgagctgctgatttgaaa
aatctcgggcctcctgaaactgctaaagacgcatttaaacaaatgttaaatgggaagcca
tggagttctaaaattcgatatgagttactggagcagcttattgattcggatgagcaaagc
cccaagaagagccggaatgagacggaggctgaggcagagacgaaagcagaaacggatcac
ggagacgattatgtggaagaagatcctgaaatagatggcacagaggataatacggaagaa
tataattgtgaccaagatattaacgatttggatgaattctag
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