Salvia hispanica (chia): 125193797
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Entry
125193797 CDS
T09851
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis00040
Pentose and glucuronate interconversions
shis01100
Metabolic pathways
Module
shis_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
125193797
Enzymes [BR:
shis01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
125193797
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Motif
Other DBs
NCBI-GeneID:
125193797
NCBI-ProteinID:
XP_047947638
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Position
1:complement(29953583..29955582)
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AA seq
390 aa
AA seq
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MIKAFNLLTLFLVCYPIVTTSTVVFNVVDYGAIGDGQADDTNAFARAWEETCASLSPPAM
IIPSGRSFLIQPLRFMGPCESNPLTILIDGNLVAPIDPSTWKCDANDCNQWLYFHKVEGL
TLLGQGIIDGRGQQWWMNKGQTRPSLMEISNSANVRVGGGLRFVNSPLMHLILHGLQSVF
VSDITVQSPEDSPNTDGIHIQASTNAHIDSCIIGTGDDCIAILNGSSNVRITNIKCGPGH
GISIGSLGKNGQEDRVEDIRVSDVVFLGTTNGARIKTWQGGRGYARDIHFERFWFRDTIN
PIIIDQFYCNQRQCTTSNSAVEISNVSFKMMVGSSGRENVVVFNCSEAVPCRDIVVEDMH
IVATGDKPATYGCANVQGRAQGHLVPNIAF
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgataaaagctttcaatttgttaactttatttcttgtttgttatccaatcgtaacaacg
tcgacagtagtcttcaacgttgttgattatggagcaattggcgatggacaagctgatgat
acaaatgcattcgcaagagcatgggaagagacatgtgcatcattgtcgcctccggccatg
ataattccttcagggaggtcattcttgatccaaccattgcgcttcatgggcccttgtgaa
tcgaaccctctcaccattttgatagatgggaatctagtggcgcctattgatccttcaact
tggaaatgtgatgccaatgactgtaaccaatggctctacttccacaaagtcgagggctta
acgctgctcggccaaggcatcatcgacggtcgtggccaacaatggtggatgaacaaaggc
caaaccagaccaagccttatggagatctcaaactcagctaatgtcagagtaggtggcggt
ctgagatttgtgaacagccctttgatgcacctcatcctccacggattacagtcagtgttc
gtctctgacatcacggtacaatctccagaggacagtcccaacactgatggaattcatatt
caagcctctacaaatgcccatattgatagttgcattattgggacaggggacgattgcatt
gcaatacttaatgggtcgtcgaatgtaaggattacaaacatcaaatgtggacctggacat
ggaataagcatcggaagcttaggtaagaatggacaagaagacagagtcgaagatattaga
gtgagcgacgttgttttcttaggcaccaccaacggtgcaaggatcaagacatggcaggga
ggaagagggtacgctagagacatacattttgaacgattttggtttcgagacacaattaat
ccgatcatcatcgaccaattctactgcaatcaacgccaatgcacaacaagtaattcagca
gttgagatcagcaacgtgagtttcaaaatgatggtgggaagttcggggagagagaatgtg
gtggtgttcaactgcagcgaagccgttccttgtcgggatatcgtggtggaagacatgcac
attgtcgcgacgggggataagccggcaacctacggctgtgccaacgtccaaggaagagct
caaggccatctcgttcctaatattgcattttga
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