Salvia hispanica (chia): 125193901
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Entry
125193901 CDS
T09851
Name
(RefSeq) translation initiation factor IF-2, chloroplastic
KO
K02519
translation initiation factor IF-2
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
shis03012
]
125193901
03029 Mitochondrial biogenesis [BR:
shis03029
]
125193901
Translation factors [BR:
shis03012
]
Eukaryotic type
Initiation factors
MTIFs
125193901
Prokaryotic type
125193901
Mitochondrial biogenesis [BR:
shis03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
125193901
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EF-G_D2
IF-2
MMR_HSR1
GTP_EFTU_D2
Ras
IF2_N
Roc
RsgA_GTPase
CYTH
Arf
Motif
Other DBs
NCBI-GeneID:
125193901
NCBI-ProteinID:
XP_047947792
LinkDB
All DBs
Position
6:complement(24789362..24794980)
Genome browser
AA seq
1006 aa
AA seq
DB search
MASLASLANLGSLNMISFGNFDGSVCLVRSISIHRNGNSFSGRRWRYVGVCRYSVTTDYI
AEQGTSVSLDSTYGGSKESDTNAFLKAAPKPVLKSGSKPNPLLNMSSDESKVNTRSDAGR
VSDAEEERSKVIESLGEVLEKAEKLETSKKPDAPASKPLTSEVVNQRNGKPFSSAESTNR
KSNNKTNKSVWRKGNPVSSVQKIVKETVKQEPRTDGGGVSVSSSQPAAPVRPPSPPQKIQ
PKLQERPSVAPPSPPIKKPITLKDVGAGPKPLVSNGTGSPPKSKERKPILIDKFASKKPV
VDPVIAQAVLAPTKPVKTFGPVKFKEGFRKKGGPSGAPRRRLDEDGIQDEDASELDVSIR
GAATARKGRKWSKASRKAARLQAAKDAAPVRVEIMEVEEDGMSTEELAYNLATSEGEILG
YLYSKGIKPDGVLKLSKDVVKMVCEEYEVEVIDADPIRVEELAKKKEILDDDDLDKLELR
PPVLTIMGHVDHGKTSLLDYIRKSKVAASEAGGITQGIGAYRVQVPFDGKPQTCVFLDTP
GHEAFGAMRARGARVTDIAIIVVAADDGIQPQTTEAIAHAKAAGVPIIVAINKIDKDGAN
PDRVMQDLSSIGLMPEEWGGDIPMVKVSALKGENVDELLETVMLVSELQELKANPNRNAK
GTVIEAGLDKSRGPVATFIVQNGTLKRGDIVVCGEAFGKVRALFDDQGKRVDEAGPSIPV
QVIGLNNVPLAGDEFEVVGSLDIAREQAESRADYMRNERIMEKAGDGMITLSSLASAVSA
GKTVGLDLHQLNIILKVDLQGSIEAVRQALQVLPQTNISLKFLLQATGDVSSSDVDLAVA
SKAIIFGFNVKVPGSVKSQADSKGVEIRLYRVIYDLIDDVRNAMEGLLDTVEEEVPIGMA
EVRAVFSSGSGRVAGCMVTDGKLVKGCGIRVVRKGKEVHVGVLDSLRRVKEMVKEVNSGL
ECGIGAEDYDDWEEGDSVEAFNKVEKKRTLEEASALMSATLEEVRR
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atggcttcattagcttcccttgcgaatttggggagcttgaacatgatttcttttggtaat
tttgacggctctgtttgtttagttaggagcatttctattcataggaatgggaatagtttt
agtggaaggaggtggaggtatgttggtgtttgtagatattctgtaacgacggattacatt
gcggaacaagggacttcggtgtctcttgattcgacctacggaggtagcaaagagagtgac
accaacgcatttctcaaggcagctccaaagcctgtgttgaaatcggggtctaagccgaat
ccccttcttaacatgagctcggatgagtcgaaagttaacacgaggtcggatgctgggagg
gtgagtgatgcagaggaagagaggagtaaggtgattgagtcgttaggagaggtgcttgag
aaggcggagaagttagagactagcaagaaacccgatgcgcctgctagcaaacccttgact
agtgaagtagtgaaccaaaggaatggtaagccatttagttccgcagagagcacaaatcgc
aagtctaataataagaccaataagagtgtctggcgcaaaggtaatcccgtgtcgtctgtg
caaaaaattgttaaggagacggtaaaacaagaacctagaacagatggaggaggggtttcc
gtgtctagttctcagcctgctgctcctgttagacccccgtctccacctcaaaaaatacaa
ccaaaattacaggagaggccctcagtagctcctccttcgcctcctataaagaaacctatc
acactgaaggatgtcggggcaggtccgaagccacttgtttcgaatggaactggttcacct
ccaaagtctaaagaacggaaaccaattctaattgataagtttgcatctaagaaaccggtg
gttgatcctgtgattgctcaagctgttttagcacctacaaaaccagtgaagacatttggt
cctgtaaagttcaaagaaggatttagaaagaagggtggtccatccggagcacctcgtagg
cgtttagatgaggatggtattcaagatgaggatgcatctgaactagatgtttctattcgt
ggtgctgcaactgctagaaaaggaagaaaatggtccaaagcaagccgaaaggctgccagg
cttcaggcagcgaaagatgcagcacctgtcagagtagaaatcatggaagttgaggaagat
ggtatgtcaaccgaggagttggcctacaacttagccactagtgaaggtgagattctcggg
tatctgtactctaagggaatcaagcctgatggtgtcctaaagctgagtaaagatgtggtt
aagatggtctgtgaagagtatgaggtggaagtcattgatgctgatcctatcagggtggag
gaattggcaaaaaagaaggaaattcttgatgatgatgacttggataagttagaattgagg
cctcctgtgctaaccataatgggccatgttgatcatggaaagacgtcactcttggactac
atacggaagagcaaggtggcagcatctgaagctggtgggatcactcaagggataggggct
taccgagttcaagtacctttcgatggaaagccacaaacatgcgtttttcttgatactccc
gggcatgaagcatttggggcaatgagagcacgtggagcaagagtgacagatatcgctatt
attgtagttgcagctgatgatgggatccaacctcaaacaactgaggctattgcacatgcc
aaagcagcaggagtcccaatcattgtagctataaataagatagataaggatggagctaat
ccagatcgtgtcatgcaagatctttcatctattggattgatgccagaagagtggggtggt
gacatcccaatggttaaggtaagtgctctcaaaggggagaatgttgacgaattgctggaa
acagtcatgcttgtttctgagttgcaagagctgaaggcaaacccaaatagaaatgctaaa
ggaacagttattgaagctggtctggataaatccagaggacctgtagctacattcattgtg
caaaatggaacactcaaaagaggagacatagtagtttgtggtgaagcttttggaaaggtg
agggctttatttgatgatcaagggaaaagggttgatgaagcagggccttcgattccagta
caggttattggattaaataatgttcctttagctggtgatgagtttgaggttgttggttca
cttgatatcgctcgagaacaggcagagtcacgggcagattatatgaggaatgagcgtatt
atggaaaaagctggagacggaatgattacactatcctcgttggcttctgctgtttcagcg
gggaaaactgttggattagatcttcatcagcttaatataatactgaaagttgatcttcag
gggtcgattgaggctgtcaggcaagctctgcaggtgcttccacaaactaacatcagtctg
aagtttctactgcaagcaacgggggatgtcagctccagtgatgttgaccttgcagtggca
agtaaagcaattattttcggctttaatgttaaggtacctggttcagtcaagagccaagca
gatagcaaaggtgttgagattcggctgtacagagttatctacgatcttattgatgatgtt
cggaatgcaatggagggactcctagatacagttgaggaagaggtgcctataggaatggcg
gaagtgagggctgtattcagcagtggcagtgggcgtgttgcaggatgcatggtgacagac
ggcaagctagttaaaggctgtggaattcgcgtggttagaaaaggcaaagaagttcatgtt
ggcgtacttgattccttaagacgggtcaaggagatggtgaaagaggtgaattctggacta
gagtgtggaattggagcagaggattacgatgattgggaggaaggagacagtgtggaggcc
ttcaacaaagtggagaagaagaggacgctagaagaggcatcggccttaatgtcagctacg
ctggaggaagtacggagataa
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integrated database retrieval system
