Salvia hispanica (chia): 125193950
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Entry
125193950 CDS
T09851
Name
(RefSeq) fanconi-associated nuclease 1 homolog isoform X1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
125193950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shis03400
]
125193950
Enzymes [BR:
shis01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
125193950
DNA repair and recombination proteins [BR:
shis03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
125193950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VRR_NUC
FAN1_HTH
FAN1_TPR
HIRAN
TPR_6
Flg_hook
zf-WRNIP1_ubi
Motif
Other DBs
NCBI-GeneID:
125193950
NCBI-ProteinID:
XP_047947864
LinkDB
All DBs
Position
6:40622425..40629816
Genome browser
AA seq
966 aa
AA seq
DB search
MLTGRESLLRVIGKRRRFLPNRRSLLHAASPSPSSSILERNENVETDSHEQRPDGDAAES
VNCPVCGAALPGADNALINSHVDDCLAPKGSKRKLSQATLFQLNFSRSKAKLHSPQLANE
LVIPSVPDETTTVDSIHDLNGLGWSDEYANKGLENDLNANPEEKIICKGTASDKFASPSL
PCDIGEGRKDGVDEFSDDYDISKVVIPTLIVGRRYGSRESVDPQSRICLVRDHGNVNDPN
AIKVLCVDCGSDSILGYIPRELAQYLSTLIEKFHFNFEGSITSVPQDPRTAIPIQIVCSN
VELCDQKYCNMQEFKTIWKHVLRVAELAKSNPSGITRYQRNLELLIQEVLKSNRHLFTDN
EVSLLEAFDSLPDDSKRLFPRLYTRKGPWFRMSSMSYAEIADHNQAIKGLVEAGYLCSFL
PRNELEEDDIEEALNILNVDELREALLLVNKKCIHGTRKQDFIKLLLSSNTGGPCFDLRG
FVLAKTGSCVKVSPLAELLVWRAERLFFLNGEQDLSAFLLVDLGIVKYPSYRCIISEPIF
PNRSDVLSYEEAIEISQIMVESLDENDMELVLRCTDISVSRMSTCSTGGSKDSFLSHFSA
SWVYSKVVLLGVSFLEREKRYTEAIDLLRQLLNTFTSDRRRGYWTLRLSVDLEHLGRVDD
SLQIAEGGLLDPWVRAGSRVALQRRVLRLGKPPRRWKIPSYSNSVNRKIVQVLVQGRPLN
GKIGAKSIFYGEDGERCGVEKLALQYYAGEGGGWQGVHSESGIWLTIFGILMWDVVFADV
PNVFRTKFQTAPLDLGTDSFYETRKSLIEAQLEKIRDGMAEEMLITTWELHVGTACRGVN
WEKHSLADLRVAAKCIGGACLASICRHLAQGYRSWSSGMPDLLLWRLHDCYRGEAKLVEV
KGPRDRLSEQQRAWLLVLMDCGFHVEVCKTRCAPSSPYLPPIHAYRRISGIFLPRLASSR
LHHTNP
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgcttactgggcgcgaaagcttgctcagagtcatcggcaaacgacgccgttttctcccc
aatcgccgatccctgctccacgcggcctctccctctccgagttcgagcatattggagaga
aatgaaaatgtcgagacagattcacatgagcaaagacccgacggcgatgctgctgaatcg
gtgaattgccctgtctgcggggccgcacttcccggcgcggataatgccctcatcaattct
catgtagatgattgccttgctcctaaaggaagtaagcggaaactcagtcaggccaccctt
tttcagttgaacttctcaaggtccaaagctaaattgcactctccgcagctagccaatgaa
ctagttattccaagcgtgcctgatgaaacgaccactgtagattcgatccatgacttgaat
gggttgggctggtctgatgagtatgctaacaagggtttggaaaacgatttgaatgcaaat
cctgaagaaaaaattatttgcaaaggcaccgctagtgataaatttgcctcgccatcgtta
ccatgtgacattggtgaagggcgtaaagatggtgtggatgaattttcagatgattatgac
atatctaaggttgttattccaactctcattgttggccgtaggtatggaagtagagagtca
gtagatcctcaatcaaggatatgcctcgttagagaccatgggaatgttaatgatccaaat
gctatcaaggtactttgtgtagattgtggatctgatagcattttgggatacataccccga
gaattagcccagtacttgtctactctaatagagaagttccactttaactttgagggcagt
ataacttctgtaccacaagatcctcgcacagctattccaattcagattgtatgctcaaat
gtggaattatgcgaccaaaaatattgcaatatgcaagaatttaagactatatggaaacat
gttttacgtgtcgctgaacttgcaaaatcaaatccatctggaattaccaggtatcagcgt
aacctggaattgcttatacaagaggtgttaaagagtaaccgacatctcttcacagacaac
gaggtgtctttgttagaagcatttgactcgcttcctgatgatagtaaaagactctttcct
cggctgtatacacgcaaagggccctggtttcggatgtctagtatgtcatatgctgagata
gctgaccacaatcaagcaattaaggggcttgtagaagctgggtatctgtgctcatttttg
ccaaggaatgaactagaagaggatgatatagaggaagctttgaacatactaaatgttgat
gagctgcgggaggctctgttactggttaacaagaaatgcattcatggtacaaggaagcaa
gacttcattaagttgctgctatcatcaaacacaggtggtccttgttttgacctccgaggt
tttgttctagctaaaactggttcctgtgtaaaagtatctccacttgccgaacttctagta
tggcgagctgagaggcttttcttcctcaacggagagcaggatctgtcagcctttttgcta
gtggacttgggtattgtaaaatatccttcttatagatgtataatctcagagccgattttt
ccaaataggagcgatgtgctatcttatgaagaggcaattgaaatttcacaaattatggtg
gagtctcttgacgagaacgacatggagttggtcttaagatgcacagacatatctgtttcg
cgcatgtcaacttgttcaactggtggatcaaaggactcctttttatctcatttctcagcc
tcatgggtgtactcgaaggtggtcttattgggtgtgtcctttcttgaacgcgagaagagg
tacactgaggccattgatttactcaggcaactactaaatacattcacttcagatagaaga
aggggatattggacattgcggctctctgttgatttggaacatcttgggcgtgtagatgac
agcttgcaaatagctgagggtggtttacttgatccatgggttcgtgctggttcacgagta
gcgctgcaaaggagagtgctgcggttgggtaaaccgcccagacgctggaaaatacccagt
tattctaattcagtcaaccggaagattgttcaggttcttgttcaaggaagaccgttgaat
ggtaaaataggagcgaagagcatcttctacggtgaggatggagaacgatgtggagtagaa
aagcttgcactacagtattatgccggggaaggaggtggttggcaaggcgttcactcagag
agtggcatttggcttacgattttcgggatcttgatgtgggatgtcgtttttgctgatgta
ccaaatgttttccgcaccaaatttcagactgcaccattggatctcgggacagatagcttc
tatgagaccagaaagagcctcatagaagctcagttggagaaaatccgagatggcatggca
gaggagatgctcatcacgacgtgggagttgcatgttggaactgcctgtcgaggggtgaac
tgggagaagcactcgctggctgatcttcgagttgctgcaaaatgcatcggaggtgcgtgc
cttgcatccatctgcagacatctggctcagggttaccggagctggtccagtggcatgcct
gacttacttctgtggcgtctccacgactgctacagaggcgaagcaaagcttgtggaggtg
aagggccccagggaccgactctcggaacagcagcgcgcgtggttgcttgtcctcatggac
tgcggcttccatgtcgaggtttgcaagacgcggtgcgctccttcctcaccatatcttcca
ccgattcacgcctatcggaggatctcaggcatctttcttcctcgcttagcctccagtcga
ctgcatcataccaatccctga
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