Salvia hispanica (chia): 125193994
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Entry
125193994 CDS
T09851
Name
(RefSeq) serine/threonine-protein kinase VPS15
KO
K08333
phosphoinositide-3-kinase, regulatory subunit 4 [EC:
2.7.11.1
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
125193994
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
shis01001
]
125193994
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shis04131
]
125193994
Enzymes [BR:
shis01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
125193994
Protein kinases [BR:
shis01001
]
Serine/threonine kinases: Other
VPS15 family
125193994
Membrane trafficking [BR:
shis04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
125193994
Autophagy
Autophagosome formation proteins
PI3K complex
125193994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS15-like_hel
Pkinase
WD40
WD40_Prp19
WDR55
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
HEAT
PK_Tyr_Ser-Thr
Beta-prop_TEP1_C
Beta-prop_EML_2
Beta-prop_TEP1_2nd
NBCH_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
PEP5_VPS11_N
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
Keratin_2_head
Cohesin_HEAT
TCAD9
Beta-prop_Vps41
APH
Beta-prop_IP5PC_F
Adaptin_N
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
125193994
NCBI-ProteinID:
XP_047947939
LinkDB
All DBs
Position
6:30597632..30607019
Genome browser
AA seq
1548 aa
AA seq
DB search
MGNKIARTTQASATEYYLHDLPSSYNLVLKEVLGRDRFLKSILCKHDEGLVLVKVYFKRG
DSIDLRDYERRLVRISDIFSKLDHPHVWPFQFWLETDKAAYLLRQYFFNNLHDRLSTRPF
LSLVEKKWLAFQLLYAVKQSHEHGVCHGDIKCENVLVTSWNWLYLADFASFKPTYIPYDD
PSDFSFFFDTGGRRRCYVAPERFYEHGGEAQVSQDANLKPSMDIFSVGCVIAELFLEGQP
LFELSQLLAYRRGQYDPTQHLEKIPDSGIRKMILHMIQLDPESRCSAESYLQNYAGVVFP
CFFSPFLHKFYSLLNPLSCDARVLACETSFQEILRQMLGNRAVEDVVSETETSNNDTSHL
PEHIKQGSTGADKSSNERKETKKGITRDRFDLLDNMSTLLRNVKLNNGNLSMDTMQDSSV
KTIDSQNQKNRGLQSPGEVIQSISNKFQRSHHPFLKKITMTDLSSLISDFNNQSDSFGMP
FLPLPQDILSCEGMVLIASLLCSCIRNVKVPFIRRAAVLLLKSCSLYIDDEDRLQRILPY
VIAVLSDPAAIVRCAALETLCDILPLVRDFPPSDAKIFPEYILPMLSMLPDDPEESVRIC
YGSNISKLALTAYGFLIHSISLTEAGVLNENSSRKSSLPASDFYGEPQRLNNDAQLGQLR
KSIAEVIQELVMGPKQTPNIRRALLQDIGNLCWFFGQKQSNDFLLPILPAFLNDRDEQLR
TVFYGQIIYVCFFVGQRSVEEYLLPYIEQALIDSTESVIVNALDCLAILCRSGFLRKRVL
LEMIERAFPLLCYPSKWVRRAAVTFIAASSENLGAVDSYVFLVPVIRPFLRRQPASLASV
KALLGCLKPPVSREVYHQVLENARSSDMLERQRKIWYNASSQSRKSEAIDLLQRTAKELD
PIKCMSDRQNDFGHHSFTSTSAEQFDSSKLDDNESRFKAMGNLMQNSLSQEEAHDRGASE
KSQLSGFMSPQMSCMNSFIDKSAESVPLYQFKFDHRRTSTNAPAVSDASLPYNSLGFSTS
SLPWMDPVNKSFSLASTIPPPKLVSGSVYVGNGPAQLRRVVHEVDDRETDETAFVGNKFH
ETGVPDRIKGGSLTIGDNSVEATESTSLAWSSTIPDSGWRPRGVLVAHLQEHRSAVNDIS
ISMDQQFFVSASEDSTVKIWDCKKLEKDISFRSRLTYSLGGSRAMCVAVLQGTTQIVVGA
SDGMMHMFSVDHISRGLGNVVENYSGITDVKKTGFGEGAILSLLNYSADGNTSQMILYST
QNCGVHLWDTRTNSNSWNTKVSPEEGYISSLVADPCGNWFVSGSSRGVLTLWDLRFCIPV
NSWQYSLPCPIEKMCLFVPPSGTPLSVATRPLVYVAAGCNEVSLWNAENGSCHQILRAAN
LESDAENSESPWALARPSSKTNSKSEIRRSTNSKYRVDELNEPSIRVPGIRALLPLPGGD
LLTGGTDLKIRRWDHFSPERTYCVCGPSIKGVGNDDFYETKSSFGVQVVQEAKRRPLATR
LTGKAILAAAATDSAGCHHDSVLSLASVRLNQRLLISSSRDGAIKVWK
NT seq
4647 nt
NT seq
+upstream
nt +downstream
nt
atggggaacaagatcgcgcggacgacgcaggcctcggccacggaatactatctgcatgat
ttgccgtcttcctacaacttggtgctcaaggaagtcctcggcagggaccgctttctcaag
tccatactctgcaagcacgatgagggtttggtgctcgtcaaggtctacttcaagcgcggc
gactcaattgatttgcgagactatgagcgccgtctcgttcgcattagcgatatattctcc
aagctcgatcacccccatgtctggcccttccagttttggcttgaaacagataaagctgct
tatttgttgaggcaatacttctttaacaatcttcatgatcggctgagtactcgaccattc
cttagtcttgtcgaaaagaaatggttggcttttcagttgctttatgccgtgaaacagagt
cacgagcatggagtgtgccatggcgatattaagtgtgagaatgtgttggtcacttcctgg
aactggctctaccttgctgactttgcatcatttaagcctacatatatcccttatgatgat
ccctctgatttttcattcttcttcgatactgggggaagaagacgctgttatgttgcacct
gagaggttctatgagcatggtggggaggcacaagtctcccaagatgcaaatttgaagcca
tcaatggatattttttctgtagggtgcgtgattgccgagctttttctcgaaggccaaccc
ttgtttgaactttcccaactccttgcgtatcgaagaggacaatatgatcctacccagcat
cttgaaaagattccagattcaggaatccgtaagatgattcttcatatgattcaactagac
ccagagtcaaggtgctctgctgagagctacctgcagaactacgcgggtgttgtgtttcca
tgtttcttctcaccgtttctccataagttctattccttattaaatcctctgagttgtgat
gcaagggttctagcatgcgagacctctttccaagaaattcttagacagatgcttggcaac
agggcagttgaggatgtggtatctgaaacagaaacgtctaataatgatacaagccacttg
ccagaacatataaaacaaggttccactggggcagataaatcttcgaatgaaagaaaagaa
accaagaagggcattactcgtgatcgatttgatctcctggataacatgagtaccttgcta
agaaatgtgaaacttaacaatgggaatttgagcatggacacaatgcaagatagtagtgtg
aagaccatagactctcaaaatcagaagaaccgcggtttacaatctcctggtgaggtcatt
caaagtatctccaataaattccagcggagtcaccatcctttcctgaaaaagatcacaatg
actgatttgagctcgttgatatcagattttaataatcaatcagattcttttggaatgcct
tttctgcctctacctcaggatatattaagctgtgagggtatggttttgattgcttcactt
ctatgttcttgcattcgcaatgtcaaggtcccttttataaggagggctgctgttttactg
ctgaagtcttgttctttgtacattgacgatgaagatcgactgcagcgtatccttccctat
gttatagctgtgctttcagatccagctgccattgtccgttgtgcagcactggagactttg
tgtgacattctcccgctagtcagggattttcctccaagtgatgccaaaatctttcctgag
tatattcttcctatgctttccatgcttcctgatgatcctgaggaaagtgtgaggatttgc
tatggcagcaatatatctaaactggcactgactgcttatgggttcttgattcactcaata
agcctgaccgaggctggggttcttaatgagaattcatcacgaaaatcatcactgccagcc
tcagacttttatggagagcctcagaggctgaataatgacgcccagcttggacagttacgg
aaatctattgcagaggtcattcaagaacttgtgatgggtccaaagcaaacaccaaacata
aggagagcactcctgcaggatataggcaatctttgttggttttttggccagaagcagagt
aatgattttttgctacctatcctccctgcttttctcaatgatcgcgatgaacagctgaga
actgtattttatgggcaaataatatatgtctgtttctttgtgggccaacggagtgtagag
gaataccttttaccgtatattgagcaagcgcttattgatagcacggaatccgtgatcgtc
aatgcattggattgcctggccattctttgtagaagtggtttcttgaggaagagggtactg
cttgagatgattgagcgtgctttccctttgctatgttatccaagtaagtgggtcaggaga
gcagctgttacatttattgcggctagtagtgagaaccttggtgcggtagattcttatgta
tttctggtcccagttatacgccctttcttgcgcagacaaccagcatctttagcctcggta
aaagctcttcttgggtgtctgaagccgcctgtctcaagagaggtataccatcaggtttta
gaaaatgccagaagttcagacatgctggagagacagagaaagatttggtacaatgcatca
tcacagtctagaaaatctgaagccatagacttacttcagagaactgccaaggagctggat
ccaattaaatgtatgtctgacagacaaaatgactttggacatcatagctttactagcaca
tctgccgaacagtttgattcctctaagttagatgataatgaaagcaggttcaaagctatg
ggaaatttaatgcaaaactctttgagccaagaagaagcccatgaccgtggtgcctcagaa
aaatctcagctctctggatttatgtctccccaaatgagctgtatgaacagcttcattgat
aaatcagcagaaagcgtacctctataccagtttaagtttgatcacaggcggacatcaacc
aatgctccagctgtttctgatgcttcgttaccatataattccttaggtttcagtacttct
tctctgccttggatggatccagtaaataaatcatttagtttagcaagtacaatacctcct
cctaagcttgtttcaggatcagtgtatgttggtaatggtcctgcacaattgagaagggtt
gtacatgaagtagatgatagggaaactgatgaaacagcttttgtgggtaacaaatttcat
gaaacaggagttcctgacagaataaaagggggttccctcaccattggggataactcggtt
gaggcaacagaatcgacatccttagcatggtcatcaactattcctgattcaggatggaga
cctcgcggggtgttagttgctcacttgcaagagcacagatctgccgtcaatgatatttct
atttcaatggaccagcaattttttgtgagtgcttctgaagattctactgtaaagatatgg
gattgcaagaaactggagaaggatatctcatttcggtctagactaacctattctctaggt
ggaagtcgtgcaatgtgtgttgcggtgcttcaaggtactactcaaattgttgttggggca
agtgatgggatgatgcatatgttttctgttgatcacatctccagagggcttggaaatgtg
gttgaaaattattcaggtataactgatgtcaagaaaactggttttggagaaggtgctata
cttagccttttgaattattctgctgatggtaatactagccaaatgattctatatagcact
cagaactgtggggtccatctatgggacacaagaacaaattcaaacagttggaataccaaa
gtttctccagaggagggttatatatcttctcttgtggcagacccttgcggtaattggttt
gtatctggatcatcaaggggtgtacttactttgtgggatcttagattctgcatacctgtt
aactcatggcaatattctcttccatgccccattgaaaagatgtgtctttttgttcctcct
tccggtacccccttatctgttgcgacaaggccacttgtttatgttgcagctgggtgtaat
gaggtctctctttggaatgctgaaaatggaagctgtcaccagattttgagagcagcaaac
cttgaatctgatgctgagaattctgagtcaccttgggccttggccagaccatcttcgaag
actaactctaaatcagagataaggcgaagtacaaactcaaagtacagggttgatgaactg
aatgagccctcaattcgtgttcctggtatccgtgcattgctcccgttacctggtggagat
ttattgactggtggaactgatttgaaaattcgtcgttgggaccatttcagccctgaacgc
acgtattgtgtatgtggaccatctattaaaggcgttggaaatgatgatttctatgagaca
aaatctagttttggagtgcaagtcgtgcaggaagcaaaaagacgaccgctagcaacgagg
ttgactggaaaagcaattcttgctgctgcggctactgattctgctgggtgtcaccatgac
tcagtactctctctggcgtctgtgagattgaaccagagacttctgatatcaagcagtaga
gatggagctataaaggtgtggaagtga
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