Salvia hispanica (chia): 125194206
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Entry
125194206 CDS
T09851
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
shis
Salvia hispanica (chia)
Pathway
shis03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125194206
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shis03019
]
125194206
03012 Translation factors [BR:
shis03012
]
125194206
Messenger RNA biogenesis [BR:
shis03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
125194206
Translation factors [BR:
shis03012
]
Eukaryotic type
Release factors
125194206
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
EF-G_D2
G-alpha
Motif
Other DBs
NCBI-GeneID:
125194206
NCBI-ProteinID:
XP_047948247
LinkDB
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Position
6:complement(5082580..5088968)
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AA seq
544 aa
AA seq
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MSESATTHPTQDIADDIKALQLDSAAEDTVMANTEDWKHDIIVNPDTSGAEDAVMANTEA
GKPDTSVNHDKTDVDDAVMATSEDGKHDTTDGVKEKESIPLDDVEDVDEQTKRHLNVVFI
GHVDAGKSTIGGQILYLSGQVDERTIQKYEKEAKDKSRESWYMAYIMDTNEEERVKGKTV
EVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQT
REHVQLAKTLGVSKLLVVVNKMDEPTVKWSKERFDEIESKMSLFLKSSGYNVKKDVQFLP
ISGLMGTNMKTRMGKDICPWWNGTCLFEALDAIEIPPRDPKGPFRMPIIDKFKDMGTVVM
GKIESGTVRDGDTMVVMPNKVQVKVLAIFCDENRVRRAGPGENLRVRLSGIEEEDIIGGF
VLSSVARPVAAVSEFLAQLSILELLDNAIFCAGYKAVLHIHSVVEECEIVELTQQIDPKT
RKRLKKKPLFVKKGAVVECRVQVNNMICIEKYSDFPQLGRFTLRTEGKTVAVGKVTGLTS
SESA
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaatcggccaccacgcatccgacgcaggatatcgcggatgatatcaaggctctg
caactcgattcagctgcagaggatactgtgatggctaacacagaagactggaagcatgat
ataattgtaaatcccgataccagcggagcagaggatgctgtgatggcgaatacagaagct
gggaagcctgatacatctgtaaatcatgacaagacggatgtagacgatgctgtgatggct
acttcagaagatgggaagcatgatacaacagatggagtgaaagagaaggaaagcattcct
ttggatgatgtcgaggatgtggatgagcagacaaagagacacttgaatgttgtattcatt
ggtcatgttgatgctgggaagtccacaattggagggcaaattctttatcttagtgggcaa
gttgatgaacgcacaatacaaaagtatgagaaagaagctaaggacaaaagtagggagagt
tggtatatggcatatatcatggacacaaacgaagaagagagggttaaggggaaaactgtt
gaagtcgggagagctcactttgagacagaaaccacaaggtttacaatattggatgccccg
ggacacaaaagctatgtgccgaacatgatcagcggagcatctcaagcagatataggtgta
ctagtgatttcagctcgaaagggagaatttgaaactggttatgagagaggtggacagaca
cgtgaacatgtccagctagcaaaaaccttgggagtttctaagcttcttgtcgttgtcaac
aaaatggacgagcctactgtgaagtggtccaaagagagatttgatgagattgagtcaaaa
atgtctctatttttgaaatcctcaggttataatgtgaaaaaagatgttcagtttctccca
atatctggtcttatgggcacaaatatgaagactagaatgggcaaagatatatgtccatgg
tggaacggtacatgtctttttgaagctcttgatgctattgaaattccaccacgtgatccc
aaaggtcctttcagaatgcctattatcgacaaatttaaggacatgggaactgttgtcatg
gggaaaatagaatctgggaccgtccgtgatggggacactatggtagtcatgcctaataag
gtacaagttaaagttcttgccattttctgtgatgaaaatagagtgaggcgtgctggacct
ggtgaaaacttgcgtgtcaggttgtcggggattgaagaagaggatattatcggcgggttt
gttttaagtagcgttgcaagaccagtagctgctgtatcagagtttcttgcccagctgtca
attttggagttactcgacaatgcaattttttgtgctgggtacaaggctgttctacacatc
cattctgttgtggaagaatgtgagattgttgagttgacacagcaaattgatccaaaaacc
agaaaacgtttgaaaaagaaaccactttttgttaaaaaaggtgctgttgtggaatgccgc
gttcaggtgaacaacatgatttgcattgagaagtactcggactttccacagcttgggcgg
tttactctccgcactgaagggaaaactgttgctgtgggaaaagtaactgggctgacttca
agtgagagcgcttaa
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