Salvia hispanica (chia): 125194236
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Entry
125194236 CDS
T09851
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1B-like isoform X1
KO
K15559
regulator of Ty1 transposition protein 103
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shis03021
]
125194236
Transcription machinery [BR:
shis03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
125194236
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
CTK3
GSDH
Motif
Other DBs
NCBI-GeneID:
125194236
NCBI-ProteinID:
XP_047948305
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Position
6:complement(27709930..27717647)
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AA seq
548 aa
AA seq
DB search
MSDEKFNETILTEKLSKLNSSQQSIESLSRWCISHRKKAKQVVETWEKLFKAAPNEQRVS
FLYLSNDILQNSRRKGSEFVNEFWKVLPTALKIVYESSNENCRKVAFRLGGVWVDSLYQV
DIWEERKVFGSRGQNLKNELLGKNPSPVSNGKIVVPNPIKVVKRDATSLRIKLAVGGLPE
KILTALQLVHDEAVNEEEALGKFQKAISSVQEIEKDVLYATSQGNLNGSDVDNIETQENV
IKQCINELEKSEAVRVDLVSQLREALQDQETKLEQLRSVISAGRSQIEQATNIRLKLTSK
SSVPLLVNQVVIEPPFPSAIPATNITVPPTNPLTSFANPTTEESKKAAAAAVAAKLTAST
SSAQMLTSILSSLVAEEAASMSSGLKRQKLEPPMSFSDGKNPEGTNSTLFPTSQQAMTSM
PPVQSSTVQTVSQVNQLQAQQFHPPPLPPPPPPPLAPPGNSPSNQMVQSNMMGLTYGYGA
NNLLPPPLSNAPTGFARPNPPPQQTQQQPQSQQLQQLQQPASGGYYRPVGIGFYGQSHQP
PTPPIHRQ
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgaaaagtttaatgagacaatccttactgagaaattgtctaaactcaatagt
tctcagcaaagcatcgagtctttgtcccggtggtgcatttctcatcgtaaaaaggctaag
caagttgttgaaacatgggagaaattgttcaaagcagcaccaaacgagcaacgcgtttcc
tttttatacttgtccaatgacatcctgcaaaatagcaggcgtaagggcagtgaatttgtc
aatgaattctggaaggttcttccaacagctctaaagatagtatatgaaagtagcaatgaa
aattgcagaaaagttgccttcagactgggtggggtttgggttgactctttatatcaggtt
gacatctgggaagaaagaaaggtttttggatctagggggcaaaatctgaaaaatgaattg
ttggggaagaatccttctccagtcagcaatgggaagatcgtagttcctaatcctattaag
gtggtgaagagagatgctacatctctcagaatcaaattagctgttggaggtttgccagaa
aagattttgactgctttgcagttggtacatgatgaagctgtcaatgaagaagaagcctta
ggaaaatttcaaaaagcaatttcttctgttcaagaaatcgagaaagatgttctatatgct
acttctcaaggaaatctcaatggttctgatgttgataatatagagacacaggagaatgtt
attaaacaatgcattaacgaacttgaaaagtctgaagcagttagagtcgaccttgtttct
cagcttagagaagcacttcaggatcaagaaacaaagctggagcagcttcgaagtgtgata
tctgctggtcgtagtcagattgagcaagcaactaatatcagactcaagctaacatcaaaa
tcctctgtgccactgctggtgaaccaagtagtgatcgaaccgccttttcccagtgcaatt
ccagcaaccaacattactgtgcctcctaccaatccattgacttcatttgcgaaccctacc
acggaagagagcaagaaggctgcagctgctgcagttgctgcaaaactcaccgcctcaaca
tcttctgcccagatgctcacatctattctttcatctctcgtagcagaagaggctgcatcg
atgagcagtggtttgaaacggcagaagcttgagccaccgatgtcattttctgatgggaag
aaccccgaaggaacgaattcaaccttgtttccgacttcgcagcaggcaatgaccagtatg
ccacctgttcagtccagcactgtgcagactgtttctcaggtgaaccaactgcaggcccag
cagtttcatccgcctcctctgccaccgccaccaccaccaccacttgcacctccaggtaat
tccccttcaaatcaaatggtccagtctaatatgatggggctgacctatggttatggtgca
aacaacctactccctccaccactctcaaatgcaccaacagggtttgctaggccgaaccct
ccgcctcagcaaacacaacagcagccacaatcacagcaactgcagcagctgcagcaacca
gctagtggtggatactacaggcctgttggtatcggattttatgggcaaagccaccagcca
ccaacgcctcccatacatcgacagtga
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