Salvia hispanica (chia): 125194284
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Entry
125194284 CDS
T09851
Name
(RefSeq) chloride channel protein CLC-c
KO
K05016
chloride channel 7
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
shis01009
]
125194284
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shis04131
]
125194284
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
shis04040
]
125194284
Protein phosphatases and associated proteins [BR:
shis01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125194284
Membrane trafficking [BR:
shis04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
125194284
Ion channels [BR:
shis04040
]
Chloride channels
Chloride channel (CLC)
125194284
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
DUF7321
TAT_signal
Motif
Other DBs
NCBI-GeneID:
125194284
NCBI-ProteinID:
XP_047948378
LinkDB
All DBs
Position
6:13209794..13214993
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AA seq
774 aa
AA seq
DB search
MDHRQPEGDYVDGGGDIENDGRGSDASSFSEAREPLLNLKSRINTTSQIAIVGAKVYPIE
SLDYEMIENDLFKQDWRSRKRVQIFQYIFLKWTLALLIGLCTGLVGFLNNMAVENIAGYK
LVITSDLMFNDKYLPAFAAFAGTNVILAICAGALCAYIAPAAAGSGIPEVKAYLNGIDAH
SILAPSTLFVKIFGSILGVSAGLVVGKEGPMVHTGACIANLLGQGGSRKYRLTWKWLRYF
KNDRDRRDLITCGAAAGVAAAFRAPVGGVLFALEEAASWWRSALLWRTFFTTAIVAVVLR
SLINFCRGGNCGLFGQGGLIMFEMHSAIPNYTNADLLAVVLIGVLGGLLGSLYNFFVDKV
LRTYTLVNERGPSFRVLLVAVITLLTSCLAFGLPWLAKCIPCPSGSEKECPTIGRSGNYK
SFQCQPGHYNDLASLFLNTSDDAIRNLLSSTNRNEFEISSLIIFFAGTYFLGITTYGIAI
PSGLFIPVILAGATYGRLVGRLLGSLSTLDLGLFSVLGAASFLGGTMRMTVSLCVILLEL
TNNLLMLPLIMLVLLISKTVADSFNHGVYDQIVQMKGLPYLEAHAEPYMKHLAAGDVCSG
PLITFSGVEKVGNIMHALETTGHNGFPVIDEPPFTDAPELCGLVLRSHLLVLLNRKKFTK
NRAVCGGKVLRTYDAFDFAKPGLGKGLKVSDIDLTPEEMEMYVDLHPITNSSPYMVVETM
SLAKAAILFRQLALRHLCVIPKTPGRHPVVGILTRHDFMPEHVLGLYPELLHHK
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggatcatcgtcagcctgaaggtgattacgttgatggaggaggtgacatagagaacgac
ggaagaggcagcgatgcttcgtcgttttcggaggcgagggagccgttgttgaatctcaag
agtagaatcaataccacctctcagattgctattgttggcgccaaggtgtatcccatcgaa
agcctcgattacgagatgattgagaatgatctctttaagcaggattggagatctaggaaa
cgagttcagatttttcagtatatttttctcaaatggacactggctcttctcataggattg
tgcacaggacttgttggtttcttaaataacatggcggttgagaatattgctggttacaag
cttgtgatcactagcgatttgatgtttaatgataagtatctcccagcatttgctgcattt
gctggtactaatgtgattctggctatttgtgctggggcactatgcgcgtatattgcccct
gctgcagctggttctggcataccagaagtgaaagcctatcttaacggcattgacgctcat
tccatcctcgctccaagtaccctatttgtgaagatttttggttccatcctgggagtttct
gctggattggttgttggtaaggaaggaccaatggtacataccggtgcctgcatagcaaat
ttacttgggcaaggaggttctcgaaaataccgtttaacttggaagtggctcagatacttc
aaaaatgatagagaccgaagggatttgattacttgtggggctgctgctggtgtggctgca
gcttttcgtgccccagttggtggtgtgctttttgcccttgaagaagctgcctcttggtgg
cggagtgctctactttggaggaccttcttcacaactgctattgtagctgttgtattaaga
agtctcataaacttttgccgcggtggcaattgtggactcttcggacaaggaggactcatt
atgtttgaaatgcattctgcaattcctaattataccaatgcagatctgcttgcagttgta
ctaattggagttcttggaggtcttttgggaagcctatacaatttttttgtggacaaagtc
ttgagaacatataccttggttaacgagagaggcccttctttcagagtcctacttgtcgca
gttattacccttctaacatcctgtttggccttcggcctgccatggttggcaaagtgcatt
ccatgtcctagtggctctgagaaagagtgcccgacaattggtcgctctggaaactacaag
agcttccaatgtcagcctggacactacaatgatctggcgtccctttttctcaacaccagc
gatgatgccatccgtaacctgttgagttcgacaaacagaaacgagtttgaaatctcctca
ctgatcattttctttgctggaacatatttcctaggaattactacttatggcattgctatc
ccatctgggcttttcattcctgtcatacttgctggagccacgtacgggcgccttgttgga
agactcttgggttctttgtctacccttgacctcggcctcttctccgttctgggagctgct
tctttcctcggtggcaccatgaggatgacagtgtctctttgtgtcatactcctggagctt
accaacaacctactgatgctccccttgataatgctcgtcctcctcatatcgaaaacagtg
gcggacagtttcaaccacggggtctacgaccaaattgtgcagatgaaggggttgccctac
ttggaagcccatgcagagccatacatgaagcacctggccgctggggacgtttgctccggc
ccattgatcaccttctctggtgttgagaaggtagggaatataatgcatgctctggagacg
accggacacaacgggtttccagtgatcgacgagcctccattcacagatgcaccggagctg
tgcggccttgtgctgaggtctcatctactggtgctgctcaaccggaagaagttcaccaag
aacagggcggtgtgtggagggaaagttttgaggacgtatgacgccttcgactttgctaag
cctgggttggggaaggggcttaaagtgagcgacatcgacttgaccccggaggaaatggag
atgtatgttgatctccatccgattaccaactcatccccctacatggttgtagagaccatg
tctcttgccaaagccgccatcctctttcgacaactcgccctccgacacttgtgcgttatc
cccaaaacgcccgggagacatccggtggtcggaatcttgacaaggcacgattttatgccg
gagcatgtattggggctctaccctgagcttcttcaccacaaatag
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