Salvia hispanica (chia): 125194312
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Entry
125194312 CDS
T09851
Name
(RefSeq) transcription factor MYC2-like
KO
K13422
transcription factor MYC2
Organism
shis
Salvia hispanica (chia)
Pathway
shis04016
MAPK signaling pathway - plant
shis04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
125194312
04075 Plant hormone signal transduction
125194312
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shis03000
]
125194312
Transcription factors [BR:
shis03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
125194312
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Gene cluster
GFIT
Motif
Pfam:
bHLH-MYC_N
HLH
bHLH-TF_ACT-like_plant
bHLH_INO4
Rootletin
Motif
Other DBs
NCBI-GeneID:
125194312
NCBI-ProteinID:
XP_047948414
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All DBs
Position
6:3573051..3575220
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AA seq
610 aa
AA seq
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MINYRTPSSDPIHMNLWSSSSAASTVADADASMVDTFMSSSSDLTSFWPSSSSYAPPPPA
EPHFLNQETLQQRLLALIEGARESWTYAIFWQSSAPDFASPSLLGWGDGYYKGDDNKLPR
QTASSPAEQDHRKKVLRELNSLISGPPAAPVDDAVDEEVTDTEWFFLISMTQSFVSGSGL
PGQALYSSAPVWVTGNDRLLASHCERARQAQGFGLQTLVCIPSANGVVELGSTELIFQSS
DLMNKVRVLFNFNGTEIASSAAASASASWALNDNDPSAIWLTDPSSSAVDVTTTTTIAPS
NLNLPTKQNPSSSGLTETPFVQHQTQGFFNRELNFSEFGLNSTCKRESGEMLNFGESVKR
GVGVKDDKTKRRSPMAEDGMMSCTSGVLLKSDNHFESDQSDLEASVLKDVDSSRVVNPEK
RPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYI
NELKSKVQSVESDKEELRRELESTKRSTPAPAPAPAPTRPGQSSNAKIDMEVDVKIIGWD
AMIRVQCNKKNHPAAKLMVALRELELDVHHASVSVVNDLMIQQATVKMETRLYTQEQLRV
ALISKIAENR
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgatcaattaccgcacaccctcctccgacccaatccacatgaatctatggtcctcttct
agcgccgcctccaccgtggccgacgccgacgcctccatggtggacaccttcatgtcctcc
tcctccgacctcacctccttctggccctcctcctcctcctacgccccccctccccccgcc
gaaccccacttcctcaaccaggagaccctccagcagcgcctcctcgccctcatcgaaggc
gcccgcgagtcctggacctacgccattttctggcagtcctccgcccccgacttcgcctcc
ccctccctcctcggctggggcgacggctactacaagggcgacgacaacaaactcccccgc
caaaccgcctcctcccccgccgagcaggaccaccgcaagaaagtcctccgcgagctcaat
tccctcatctccggcccccccgccgcccccgtcgacgacgccgtcgatgaagaggtcacc
gacaccgagtggttttttctcatctccatgacgcagtccttcgtcagcggctccggcctc
ccgggccaggccctgtacagctccgccccggtctgggtcaccggcaacgacaggctttta
gcctcccactgcgagcgggcccgccaggcccagggcttcggccttcagaccctcgtctgc
atcccctccgcaaacggcgtcgtggagctcggctccactgagctcatcttccaaagctcg
gatctgatgaataaggtcagagttctcttcaatttcaacggaacggaaatcgcctcctcc
gccgccgcctctgcctccgcctcgtgggccttaaacgacaacgatccctccgccatctgg
ctcaccgacccctcctcctccgccgtcgatgtcaccaccaccaccacaatcgctccctcc
aatctcaatctccccaccaaacaaaaccctagctccagcggcctaacagaaacccccttt
gtgcagcatcaaacgcagggtttcttcaatagagagctcaatttctccgaattcggattg
aattcgacctgtaagcgtgagtctggagagatgctgaattttggggagagtgtgaagaga
ggggttggggttaaggacgacaagacgaagcggagatctccgatggccgaggacgggatg
atgtcctgcacctccggcgtgcttttgaaatccgataaccatttcgaatccgatcaatcc
gatctcgaagcctccgtgctgaaggacgtcgacagcagcagagtcgtgaacccggagaaa
cggcctaggaagcgcgggaggaagccggccaacggaagggaggagccgctcaatcacgta
gaagcggagaggcagaggagggagaagctaaatcagcgattctacgctctccgagctgtc
gtccccaacgtgtcgaaaatggacaaggcctcgcttctaggcgacgccatttcctacatc
aacgagctcaagtccaaggtgcagagcgtggaatccgataaagaggaattgagacgggag
ctggagtcgaccaagaggtcgactccagctcccgctcccgccccagcccctacgaggccg
gggcagagcagcaatgccaagatcgatatggaggtagacgtgaagatcatcgggtgggac
gcgatgatacgagtgcagtgcaacaagaagaatcatcccgcggcgaagctgatggtggcg
ctgagggagctagagctcgacgttcatcacgctagtgtctctgttgtgaatgatttgatg
atacagcaagccacggtgaagatggaaacacgactttacacacaagaacagcttagggta
gctttgatatccaaaatcgctgagaatagataa
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