KEGG   Salvia hispanica (chia): 125194361
Entry
125194361         CDS       T09851                                 
Name
(RefSeq) putative E3 ubiquitin-protein ligase RING1b isoform X1
  KO
K10695  E3 ubiquitin-protein ligase RNF1/2 [EC:2.3.2.27]
Organism
shis  Salvia hispanica (chia)
Pathway
shis03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:shis00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    125194361
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:shis04121]
    125194361
   03036 Chromosome and associated proteins [BR:shis03036]
    125194361
Enzymes [BR:shis01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     125194361
Ubiquitin system [BR:shis04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    125194361
Chromosome and associated proteins [BR:shis03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     125194361
    Noncanonical PRC1 (PRC1.1)
     125194361
    Noncanonical PRC1 (PRC1.3/1.5)
     125194361
    Noncanonical PRC1 (PRC1.6)
     125194361
SSDB
Motif
Pfam: zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-RING_5 zf-C3HC4_3 zf-RING_UBOX zf-rbx1 zf-RING_11 zf-C3HC4_5 zf-RING_4 zf-RING_6 zf-RING_10 zf-UDP
Other DBs
NCBI-GeneID: 125194361
NCBI-ProteinID: XP_047948496
LinkDB
Position
6:complement(34713946..34716804)
AA seq 359 aa
MPPQNHRRRHRRKRTPTRFISSAAPPPPSPPHQEVQQAPPEQPQIQETPPAVLDSDDSGT
DPDEYDEVITVSLSEVRSNVQCAICLGVLKSTRAVMGCLHRFCKECIDKSMRLGNKECPA
CRKHCASRRSLRDDLVFDKIIGSLFPDLEKYEKEELVLYEKEKEVNVKLQASINGCHQRQ
AEGRKPRKGKVAAARVDRECSRQSGSKLKFGGPSNGGTSGMIYKDDHHQPPVSAIPSPCI
VADQVGAEGASSPAKTNLPGWGGAGFRSQARRAATGKGTQSSRVERLAEHLANVEKSDNK
HVVTTHLQSDKLIWLKDCNDYALADVELIDKAEAKAPHISKSVLDIVRKRERLLAEMKN
NT seq 1080 nt   +upstreamnt  +downstreamnt
atgccgccgcagaaccaccgccgccgccaccgccgcaagcgcacgcctactcggtttatc
agtagtgctgctccaccgcctccgtctccgcctcatcaagaagttcaacaagctccacca
gagcaaccacaaattcaagaaaccccaccagcagtcttggattccgacgatagcggcact
gacccggatgaatacgatgaagtcattactgtgtcactttctgaagttcgcagcaatgtg
caatgcgccatttgtttaggcgtattgaagagcacaagggctgtaatgggatgcttacac
cgcttttgcaaagaatgcatagacaaatctatgaggctggggaacaaggaatgccctgct
tgccgtaagcactgtgcaagccgtcgctctttgagagatgatttagtcttcgataaaata
attggctctctgtttccagatttggaaaagtatgagaaagaggaattggttctgtatgaa
aaggagaaggaagttaatgtgaagcttcaagcatcaattaacggatgccaccaacgacaa
gcagaaggtagaaagccgcgtaagggtaaggtagcagcagcaagagtggatcgagaatgt
tctaggcagagtggctcgaaattaaagtttggtggtccgagcaatggagggacgagtggg
atgatctacaaagatgatcatcatcagcctcctgtctctgcaatcccatctccttgcata
gttgctgatcaagtaggtgcagagggcgcctcgtctccagcaaaaacaaacttgcccggc
tggggtggagccggcttcagaagccaggctcgacgtgctgcaactggcaaaggcacgcag
agcagcagagtggagagactggcagaacatctagcaaatgtggagaagagtgataacaag
catgttgtgactacacacctccaaagtgacaaacttatatggctcaaagattgcaacgat
tatgcgttggccgatgttgagctaattgacaaggctgaggcgaaggcgccacatatatca
aagtctgttttggatatcgtaaggaagcgggagagattgttggctgaaatgaaaaattaa

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