Salvia hispanica (chia): 125194417
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Entry
125194417 CDS
T09851
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
shis
Salvia hispanica (chia)
Pathway
shis03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125194417
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shis03019
]
125194417
Messenger RNA biogenesis [BR:
shis03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
125194417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
125194417
NCBI-ProteinID:
XP_047948572
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All DBs
Position
6:complement(32859565..32864454)
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AA seq
475 aa
AA seq
DB search
METDQGKLFIGGISWDTNEDRLKEYFGAYGNVVEAVIMKDRTTGRARGFGFVVFADPAVA
ERVVAEKHMIDGRTVEAKKAVPRDDQHLINRSSSSSIQGSPGPGRTKKIFVGGLASTVTE
SDFKTYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDRVLHKTFHELNGKMVEVK
RAVPKELSPGPNRSPLVGYNYGFSRGNNFLNSYPQGYGSLGGYSVRMDGRYSPLASGRAG
FSHFGSPSYGVGVNMEQGLNAGFGGGSNFGGNVGFGRVLNPYFGSSQSRYSTPIGYNANS
SRGDSFLNSSPRNVWGNGGLNASANNANSGSYFGSGSGGGFGVFRNNGTNWGTSPNAASL
GGSSSGFSGGNVGYRGGENSYALGAGGFGRNTGTGVATSSFSVSGGGYEGSYGDFYRGSS
VYGDPTWQTTSSELDHSGSFGYALGNSEDVADKDSEDYGVAYDIPNRQSNRGISA
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgaccaaggcaaactatttattggtgggatttcttgggacactaatgaggat
cgtcttaaagagtattttggagcatatggaaatgttgtggaggctgtgatcatgaaggat
cgaaccacaggacgtgctcgtggatttggctttgtagtctttgccgaccctgcagttgct
gaaagggtggttgcggagaaacacatgattgatggtcgaactgtggaagcaaagaaagca
gttccaagggatgaccagcacttgataaatagaagtagcagcagcagcattcaggggtca
ccagggcctggacgcactaaaaagatttttgtaggaggattagcatctactgtcactgag
agtgactttaaaacctacttcgatcagtttgggaccataacagatgttgtggtcatgtat
gaccacaacactcagaggccaagaggttttggtttcataacatatgattctgaggatgca
gtggatagggtgttgcacaaaacctttcatgaactcaatggaaagatggttgaggtcaag
cgagcagttcctaaagaattgtctcctggcccaaacaggagcccactagttggttacaac
tacggttttagtagagggaataacttcctcaatagctacccacaaggatatggctcactt
ggaggctatagtgtccggatggatggaagatacagtcctctggctagtggccgtgctgga
ttttctcatttcggttctccatcttatggtgtgggagtgaacatggaacaaggtttgaat
gctgggtttggtgggggctctaactttggcggcaatgtaggctttggccgtgtcctgaac
ccatactttggaagtagccagagcaggtatagtactcctattggctacaatgcaaatagc
agccgtggtgactctttcctcaactcatcacccagaaatgtttggggaaatggtggcctt
aatgcttcagcaaataatgccaactctggttcatactttggttctggaagtggtggtggt
tttggagtctttagaaacaatggaacaaattggggtacttctcctaatgctgcctcactt
gggggaagttcttctgggttcagcgggggtaatgttggttatagaggcggagaaaatagc
tatgctcttggagcaggagggtttggaaggaacacaggaactggtgtagccacttcttca
ttttctgtctcgggtggtggctatgagggatcctatggagacttttaccgtggtagctct
gtttatggtgatcctacttggcaaactacatcttctgagcttgatcattctgggtcattt
ggttatgctcttggaaattctgaagatgtggctgacaaagattctgaggattatggagtg
gcctatgacattccaaatagacaatccaatagaggaatatctgcatag
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