Salvia hispanica (chia): 125194486
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Entry
125194486 CDS
T09851
Name
(RefSeq) WD repeat-containing protein 44-like
KO
K20241
WD repeat-containing protein 44
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shis04131
]
125194486
Membrane trafficking [BR:
shis04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
125194486
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_EML
Beta-prop_EIPR1
WD40_RFWD3
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_DCAF4
WDR54
RMC1_N
WD40_like
PUB_1
Motif
Other DBs
NCBI-GeneID:
125194486
NCBI-ProteinID:
XP_047948686
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Position
6:complement(26520955..26527267)
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AA seq
885 aa
AA seq
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MSKAGEEEEDDEERFHDSLDRLLSSSNTSCSCSPSASDDDYDPDPNSSNGALLNFPRGLS
RNYDLWISQPASVEERRIRLLSQMGLNRDLRHRPSHSFSSDRLNPILEASNPRVDDDIKI
VGGGADRDARSSAMVRSKSAGECNSSEGEVCSSNSVTGESVLRVIDDNEGSIETHCRMER
SASSNRSSVSSTVSPNKPPKVKIRANCNCNGSSGVSLAIPKSGELNGGLESNGVDETNAM
CMIKNLDNGKEFVVKEVKEDGTWKKIKELGTGRQLTMEEFSSEMCVGTSPIVQELMRRQN
VEDGNKEGSDLHSDGSFGTASKSKKRASWLKSIKSVASSVTGHKERRSSDERDTSSEKGG
RRSSSATDDSQDVSFHGPEKVRVRQYGKSVKELTAMYKSQEIQAHSGSIWAIKFSLDGKY
LASAGEDCVIHVWQVVETERKGDFLFDRSDDGNFNLLLLANGSPEPSSVSPNLEGHYEKK
RRGRSSVSRKSMSLEQIVVPETVFSLLEKPICSFQGHLDDVLDLSWSKSQQLLSSSMDKT
VRLWDLSSKSCLKIFSHSDYVTCIQFNPADDRYFISGSLDAKVRIWSIPDRKVVDWNDLH
EMVTAACYTPDGQGALVGSYKGSCRLYNTSENRLLQKSQINLQNKKKKSHQKKITGFQFA
PGSTSEVIVTSADSRVRVIDGVDLVHKFKGFHNANSQISASLTSNGKYVVSASEDSYVYV
WRHEGESRPNRSKGVKVTRAYELFHCQDVSAAIPWPGLLPDPWNLQDNCGRVANGTNDRF
EDLNEYHPTTPVGETNGSEGSPLPSGCSNSPLNESLSSGANSYLFDRITVTWPEEKLVSA
TKNRVSVELLNGLQQNRSAWGMVIVSAGLRGEIKTFQNFGLPVRI
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagccggggaagaagaggaagacgacgaggagcgcttccacgactcgctcgac
cgcttgctctcttcctccaacacttcctgctcctgctccccttccgcctccgacgacgac
tacgatcccgaccccaattcctccaatggcgcgctccttaacttccccaggggcctctcc
cggaactacgacctctggatctcccagccggcctccgtcgaggagcgccgcatccgcctc
ctcagccagatggggctcaatcgagacctccgccaccgcccctctcattccttctcctcc
gatcggttgaaccccattctcgaggcgtctaaccctcgtgttgacgatgatatcaaaatc
gttggtggtggtgccgatcgggatgctaggtcgtctgcaatggtgagatcgaagtcggcg
ggggagtgtaattcgagcgagggggaagtttgttccagcaattcggtgacaggtgagagt
gttttacgtgtaattgatgataatgaggggagtattgagacgcattgtcgtatggagaga
tcggcaagtagtaatcggtcgtcggtgagcagtacggtttctccaaataaacccccaaaa
gtgaaaattagagccaattgtaactgtaatgggagctctggtgtttcattggccattccg
aagagtggggagttgaatgggggtttggagagtaatggggttgatgagacgaatgccatg
tgtatgattaaaaatcttgacaatggaaaggagtttgtggtgaaggaggttaaggaagat
gggacttggaagaagatcaaggaattgggaacagggcgccagttgaccatggaggagttc
tcatccgaaatgtgtgttgggacttcgccaattgtacaagaattgatgaggagacagaat
gttgaggatggtaacaaggaagggtcggatctacattctgatgggagctttggcactgca
tctaagtcgaagaagagggcgagttggctgaaaagcataaagagtgtggcgagttctgtt
actggacataaggaacgacgtagtagtgatgagagggatacgtcttctgagaagggtggg
aggagatcaagctccgccacggatgatagccaggatgtatcctttcatgggccagaaaaa
gttcgagttaggcagtatgggaagtctgtcaaagagctcactgctatgtacaagagccag
gagatacaggctcatagtggttcaatctgggctattaagtttagcttggatgggaaatat
ctggctagtgctggcgaggactgtgtgattcatgtgtggcaagttgtggaaacagaaagg
aagggagatttcctctttgacagatcggatgatgggaatttcaatcttctgcttctagcc
aatggatctccagagccttcatctgtatcaccgaatttagaaggtcattacgagaagaag
agaagagggaggtcatctgtaagtaggaaatccatgagtcttgagcagattgtggtgcct
gagacagtgttttccctcttggagaaacctatatgttcatttcaaggacatttagatgat
gtactggacctatcatggtccaaatctcagcaactgctttcatcttcaatggataaaacg
gtgcggctatgggatttatctagcaaatcttgtttaaagatcttctcacacagtgactat
gtaacatgcatccagtttaatccagctgatgatagatatttcatcagtggatccttagat
gctaaggtgcgaatctggagcattcctgatcgcaaagttgttgattggaatgatttgcat
gaaatggttactgcagcttgttacacacctgatggacagggggcacttgttggttcatac
aagggtagctgtcggttatacaacacatcagaaaatagattgctgcagaaaagccagatc
aatctacagaataaaaagaagaagtctcatcagaaaaaaataactggtttccagtttgca
cctggaagcacatcagaggtcattgtcacatcggctgattccagagttcgagtcatagat
ggtgtcgatctagttcacaagttcaaagggttccataacgcgaacagccaaatttctgca
tcccttacttctaatggaaaatacgtggtctctgccagtgaagattcatatgtttacgtt
tggagacacgagggtgaatcccgacctaacagaagtaaaggtgttaaggtgactcgagca
tatgagcttttccactgtcaagatgtatctgcagcaatcccttggcctgggctcttgccc
gacccatggaacctccaagataactgtggcagagtggcgaatggcacgaatgatcgcttt
gaggatctaaacgagtatcatccgactacgccagttggagaaacgaatggcagtgaaggg
tcgcccttaccatcagggtgcagcaacagcccactcaatgaatctctgtcaagtggagca
aacagctacctattcgatagaatcacagtgacgtggcctgaggagaaactcgtgtcagct
actaagaaccgtgtaagcgtggagttgttgaacgggcttcagcagaacaggtcggcttgg
ggtatggtgatagtaagtgcaggcctcagaggagaaataaagactttccagaatttcgga
ttgcccgttcgaatttag
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