Salvia hispanica (chia): 125194487
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Entry
125194487 CDS
T09851
Name
(RefSeq) trafficking protein particle complex II-specific subunit 130 homolog isoform X1
KO
K20307
trafficking protein particle complex subunit 10
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shis04131
]
125194487
Membrane trafficking [BR:
shis04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
125194487
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
Foie-gras_1
NTS_TR130
bL31_N
Motif
Other DBs
NCBI-GeneID:
125194487
NCBI-ProteinID:
XP_047948687
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All DBs
Position
6:26653767..26664797
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AA seq
1257 aa
AA seq
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MATFLPQFQSIKSSFAHIVLSVEDVSDLWPTIKKGFEERLPFKRASLNNKTRNPVLVDEL
PAEFILTTDARLRSRFPQEQSLFWFREPYATIVLVTCEDLDEFKNILKPRLKLIVQNDER
EWFIVYVSKAPAHNDQATKMAKKVYAKLEVDFSSKKRERCCKLDIHGPDPSFWDDLEAKI
MECIRNTLDRRIQFYEEEIRKLSEQRFMPVWNFCNFFILKESLAFMFEVAHLHEDALREY
DELELCYLETVNMAGKQRDFGGVEKGDDQATLLDSGKKALAQIVQDDSFREFEFRQYLFA
CQAKLLFKLKRPFEVASRGYSFIISFSGALALHESMLPFCMREVWVITACLALIGATTSN
YEDGLAAPDVEKEFYRVQGELHTLCHTKFMRLGHLVGYGSDIERSPVNSASLSMLPWPKP
AVWPPLPPDASSEVLAKEKMILQESPRLKHFGIQRKPLPLEPSVLLREANRRRASLSAGN
MSDLFDGRPSSGDGPLLDSSGTPSAVQKMSSVSMSRTLSSPGNFDGSIDRPMRLAEIFVA
AEHALRNTISDAELWKSLSSVEEFEKKYLDLCKGAADSYHRSWWKRHGVVLDGEIAAVHH
KHENYDLAANLYEKVCALYAGEGWENLLAEVLPNLAECQKILNDQAGYLSSCVRLLSLDQ
GLFLPKERQAFQSEVVRLAHSEMEHPVPLDVSSLITFSSNQGPPLELCDGDPGTLTVALW
SGFPDDITLESLSVMLTATNSTDEGAKAIKSSEAIVLRPGRNNITVSLPPQKPGSYVLGA
LTGQIGQLRFRSHSFSKGGPADTDDFMSFEKPTRPVLKVARPRSLVDLAAAVSSALLMNE
TQWVGIIVKPINYSLKGAVLHIDTGPGLSIAEKHEIEIEKHEFGANNSDHSDSPPDNHSP
VSADVKQLSLEDGKINLPDWTSNITSVLWIPLKAISHGLAEGTPAGTVPQRQSVVDGLRT
IALKLDFGVSHNQTFEKTVAVHFTDPFHVTTRVADKCSDGTLLLQVILQSQVKASLTVSD
AWLDLQDGFAHTGKGDGRPVSKFFPLIVSSKSRAGILFSICVVDTPAKDEGEESDPISVL
NIRYTISGERNLGAHSPVTKELTGPESETDPLTFRSALVLQRPVLDPCFAVGFLPLPSNG
LRVGQLVTMNWRVERLKDSGKDEDSDDLDEVLYEVNVNSENWMVAGRKRGYTSLSTKQGS
RIVISILCLPLVAGYVRPPQLGLPDVDKANISCNPPGPHLVCVLPPAFSSSYCVPAA
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atggcgacctttttgcctcagtttcagagtatcaaatcatcattcgctcacatcgttctc
tccgttgaggatgtaagtgatttgtggcctaccatcaagaagggctttgaagagaggttg
cctttcaaaagggcatctcttaacaacaagacccgcaatcctgtgcttgttgatgaacta
cctgctgaatttatactgacaacggatgcaagactacgtagtaggtttcctcaagaacag
tcattgttttggttccgggagccgtatgcaactattgttcttgttacttgcgaggatctt
gatgagttcaagaacattcttaaaccacgactcaaattaatagttcaaaatgatgaacga
gaatggtttattgtttatgtgtctaaagcaccagctcacaacgatcaggccaccaagatg
gccaaaaaagtatatgcaaaacttgaagttgatttcagctccaaaaagagggaaaggtgc
tgcaaattggatattcatggacctgatccaagtttctgggatgatttggaggctaaaatt
atggaatgcatcagaaatacacttgatagacgtattcagttttatgaagaagaaattcga
aagctcagcgaacagagattcatgccggtttggaacttttgcaattttttcattctgaag
gaaagtttggcttttatgttcgaagttgctcatctccatgaagatgctttacgtgaatat
gacgagcttgaactctgttatttggaaacagttaacatggcaggaaagcagagggacttt
ggaggagtggagaagggagatgatcaggctacactgcttgactctgggaaaaaagcatta
gcgcagattgttcaagatgactcttttagggagtttgagttcaggcagtatttatttgcc
tgccaagcaaagcttctcttcaaattaaagcgtccatttgaggttgcatcaaggggttat
tcattcataatcagcttctcaggagcattggcgttgcatgagagtatgttgccattttgt
atgcgtgaagtctgggtgatcacagcttgcttggcattaattggtgcaactacttctaac
tacgaagatggattagcagcacctgatgtagaaaaggagttttaccgtgtccaaggggag
ttacatactttatgccatacaaagtttatgcggctagggcatttagttggctatggatca
gatattgaaagaagtcctgttaacagtgcttcactcagcatgttgccttggcctaagcca
gcagtttggccaccacttccacctgatgcttcatctgaggtgcttgcaaaagaaaagatg
attctccaagaatctccacgacttaagcacttcggcattcagaggaagccccttcctttg
gaaccgtctgttcttttgcgcgaggcaaatcgtcgtagagcatctctttcagctggaaat
atgtctgacttgtttgacggtcgtcctagttctggtgatggacctctgttagacagttca
ggaactccatccgcggtgcaaaaaatgagcagtgtttccatgtcaaggaccttgtcttca
cctggaaactttgatggttcaattgaccggcctatgagacttgcagagatatttgttgct
gctgagcatgctttaaggaatacaatttctgatgcagagctgtggaaaagtttatcctct
gttgaagaatttgagaaaaaatatctagatctgtgcaagggtgctgcagacagttatcat
cgttcttggtggaagagacatggagttgtccttgatggtgaaattgcagctgtgcatcat
aagcacgaaaattatgatcttgcagcaaatctctatgagaaagtttgtgctctttatgcg
ggtgaaggatgggagaacttgctggcagaagttcttccaaatttggccgagtgtcaaaag
atattgaatgatcaagctggctacttatcttcttgtgtgagattgttgtccttagatcaa
gggttgttcttacccaaggaacgacaagcatttcagtctgaagttgtccgtcttgctcat
agtgaaatggagcatcctgtgccactagatgtctcctccttaataacattttcaagcaat
caggggcctcctctagagctttgtgatggggaccctggcacactcacagttgctctatgg
agtgggtttccagatgatattactcttgaatcacttagtgttatgcttacagctaccaat
agtactgatgagggtgctaaggcaataaagagctccgaagctattgtgctaaggcccggc
aggaacaatattacagtttctttgcccccacagaaaccaggttcctatgtgttaggggct
ctcacaggacagattggtcaattaagatttagatcacatagtttctcgaaaggtgggcct
gcagacactgatgattttatgagttttgaaaagccaacaagacccgtcttgaaggtggcc
agaccaaggtctctggttgatcttgcggctgctgtttcatctgctttactgatgaatgaa
acacagtgggttgggataattgttaaaccaataaattattcccttaagggtgctgtactg
cacatagacaccggccctggcttgagcattgcagagaagcatgaaatcgaaattgagaag
catgaatttggggcaaataactctgaccactcggatagtccacctgacaatcattctcca
gtatctgctgacgttaagcaattgagcctagaagatggcaagatcaatttgcctgactgg
acaagcaatataacttcagtcttatggattccattaaaggccatcagtcatggcttagct
gaagggactcctgcaggtacagttcctcagagacaaagtgttgtggatggattgaggacg
attgctctgaaacttgattttggagtttctcataaccagacatttgagaagacagtagct
gtgcattttacggatcctttccatgtgactacacgcgttgcagacaaatgcagtgatggt
actttgctcttgcaggtaattttgcagtcacaggtgaaagcttcgctgaccgtctccgat
gcttggctagatcttcaggatggctttgctcatactggaaaaggtgatgggagaccggtg
tccaagttctttcctcttattgtttcttctaaatcaagagctggaattctgtttagcatc
tgtgtggtagatacaccagccaaagatgaaggagaggaatcagatccaatcagtgtatta
aatatcagatatacaatatctggtgaaagaaatcttggagctcatagccccgtaactaag
gaacttactggacctgaaagtgaaacagaccctttgacctttaggagcgctcttgtttta
caaagaccagtacttgacccttgctttgcagttggttttcttcctcttccttcaaatggt
ctccgagttgggcaacttgttaccatgaactggagagttgaaaggttgaaggactcgggc
aaggacgaggattctgatgaccttgatgaagtgttgtatgaagtcaatgttaattcagaa
aactggatggtagctggaagaaaaagaggatacacatcactctccacaaaacaaggttcc
agaatagtgatctcaatactatgccttcctcttgttgctggatatgttcggccacctcaa
ctcggattgccggatgtcgacaaggcaaatataagttgcaacccaccggggccgcatttg
gtatgcgtcttacctccggccttcagctcgtcttactgtgtaccagcagcctga
DBGET
integrated database retrieval system