Salvia hispanica (chia): 125194550
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Entry
125194550 CDS
T09851
Name
(RefSeq) chaperonin CPN60-like 1, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125194550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shis03019
]
125194550
03110 Chaperones and folding catalysts [BR:
shis03110
]
125194550
03029 Mitochondrial biogenesis [BR:
shis03029
]
125194550
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shis04147
]
125194550
Enzymes [BR:
shis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
125194550
Messenger RNA biogenesis [BR:
shis03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
125194550
Chaperones and folding catalysts [BR:
shis03110
]
Heat shock proteins
HSP60 / Chaperonin
125194550
Mitochondrial biogenesis [BR:
shis03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
125194550
Exosome [BR:
shis04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125194550
Exosomal proteins of other body fluids (saliva and urine)
125194550
Exosomal proteins of breast cancer cells
125194550
Exosomal proteins of colorectal cancer cells
125194550
Exosomal proteins of bladder cancer cells
125194550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
125194550
NCBI-ProteinID:
XP_047948766
LinkDB
All DBs
Position
6:5815938..5818333
Genome browser
AA seq
383 aa
AA seq
DB search
MYRFAANLASKASVARNSSQQIGGRLGWSRNYAAKDIRFGVEARALMLKGVEELADAVKV
TMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGT
TCATVLTRAIFTEGCKSVAAGMNAMDLRRGITMAVDAVVTNLKSRARMISTSEEIAQVGT
ISANGEREIGELIAKAMEKVGKEGIAEDVESDALATLILNKLRAGIKVCAIKAPGFGENR
KSGLQDLAVLTGGQVTISKDDTVILDGLVRRNPLKKDAAVFDFPFLGGGVALLYAAKELE
KLPTANFDQKIGVQIIQNALKTPVFTIAANAGVEGAVVVGKLLESENPDLGYDAAKAEYV
DMVKAGIIDPLKVIRTALVDAAR
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgttttgcagcaaatctcgcctccaaagctagtgttgcgaggaacagcagccaa
cagattgggggtagattgggatggagcagaaattatgctgctaaagatattagatttgga
gtggaggctagggctctgatgcttaagggtgttgaagagcttgctgatgctgttaaagtc
accatgggtcctaaggggcgtaatgtagttattgagcagagctggggtgcgcccaaagtg
acaaaggacggtgtcacagttgcgaagagcattgaatttaaggacaaagttaagaatatt
ggtgctagccttgttaaacaggtggcaaatgctactaatgatgttgctggtgatggtaca
acctgtgccactgtccttactcgtgccatattcaccgaaggctgcaagtcggtggcagct
ggcatgaatgccatggatctaagacgcggcattaccatggctgttgatgctgttgttaca
aacttgaaaagcagagcaaggatgattagcacatcggaggagattgctcaggttggaact
atttctgctaatggagaaagggaaatcggtgagctgattgcaaaggctatggaaaaagtt
ggaaaagaggggatcgcagaggatgtggaaagcgatgcacttgccactcttatccttaac
aagctccgcgctggaatcaaggtctgtgcaatcaaagcgcctgggttcggtgagaacagg
aaatcaggcttgcaggatcttgctgttttaaccggtggccaagtaaccatatcaaaggat
gatactgttattcttgatggactggtgagaagaaatccattgaaaaaagatgcagcagtt
tttgattttccgtttctaggtggaggtgttgctctcctctatgcagccaaagaattggag
aagctgccaacagccaacttcgaccagaagatcggcgtccaaattattcaaaatgctttg
aagacgccagttttcacaattgcagcaaatgctggtgtggagggtgccgttgtagttggc
aaattgttggaatccgaaaatcctgacctcggatatgatgcagctaaagctgaatatgtg
gatatggtaaaggctggaatcattgacccattgaaggtcattagaactgcccttgttgat
gctgctaggtaa
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