Salvia hispanica (chia): 125194703
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Entry
125194703 CDS
T09851
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis00040
Pentose and glucuronate interconversions
shis01100
Metabolic pathways
Module
shis_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
125194703
Enzymes [BR:
shis01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
125194703
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
End_N_terminal
Motif
Other DBs
NCBI-GeneID:
125194703
NCBI-ProteinID:
XP_047948901
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Position
6:complement(12236852..12240801)
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AA seq
416 aa
AA seq
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MGNVATEPIKGIGSGFMVYLLLLCVAIFELNVVKCARITSLDSYTTFDVTEFGAIGDGIT
DDAKAFKSAWEAACNKGLATSMVTVPSGKTFLVSSVKFVGPCKSRSITFKILGTIVAHPK
ESWGNGGVGEWIMFHQVQALSVVGNGQGVIDGQGASWWPNDRENHSPTALRFSHCNNLRV
SGLKHMNSQRNHISINGCNHANISNLHITAPGTSPNTDGIDISSSSNLFIQDCVMETGDD
CIAINGGTSSVLISRVTCGPGHGISIGSLGHNGKYDEVEGIHVDNCTFIKTQNGVRIKSW
QGGAGFAKNIIFSNIIFELADNPVIIDQYYCPHKTCDTKVGAVEVSDVKYTGLHGTSVAK
NATINLRCSETVPCTGIVLEDINIESVGEQAANVAHCTNAHGSSRFCNPPINCVES
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgggcaatgttgcaactgaaccaatcaaaggaataggatctggttttatggtgtacctt
ttgttattgtgtgttgcaatattcgaattaaacgttgtgaagtgcgcaagaattacaagc
ttggattcgtatacaacatttgatgtgaccgaatttggagctataggagatgggataaca
gatgatgccaaagcatttaaatcggcatgggaagcagcctgtaacaaaggtttggcaaca
agtatggtgactgtaccaagtggaaaaacatttttggtatcttctgtcaaatttgttggc
ccatgcaaatcaagatccataacgtttaagatattgggaaccattgttgcacatccaaaa
gaatcttggggaaatgggggtgttggtgagtggataatgtttcatcaagttcaagcgctc
tctgtggtgggaaatgggcaaggtgtgattgatggccaaggtgcatcttggtggcccaat
gaccgtgaaaatcattcaccaacagcattgagattttctcattgcaacaaccttcgtgtg
agcggattgaaacatatgaatagccaaagaaatcacatttcaataaatggatgcaatcat
gcaaatatttcaaatcttcatattactgcacctggaactagtcctaacacagatggcatc
gacataagttcttcatcaaatcttttcatccaagattgtgtcatggaaacaggggacgac
tgcatcgcgatcaatggaggcacttctagtgtacttatttcaagggtcacttgtggtccg
ggtcatggtataagcattggaagtttaggtcacaacggaaaatatgatgaagttgaagga
atacatgtagataactgcacatttattaagactcaaaatggtgtgaggatcaaatcatgg
cagggaggggcaggatttgccaagaacatcatattttccaacataatctttgaattagct
gacaatcctgtaattatagaccaatactactgccctcacaaaacatgtgataccaaggtt
ggtgctgtggaagtgagtgatgtaaagtacactggactccatggaacgtcggtggcgaag
aacgcaacaataaacttgaggtgcagcgagacagtgccgtgtacgggtatagtgctcgag
gacataaacatcgagagtgttggtgaacaagcggctaatgtagcacattgcaccaatgct
catggaagttctcgtttttgcaatcctcctatcaattgtgtcgaatcttga
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