Salvia hispanica (chia): 125195306
Help
Entry
125195306 CDS
T09851
Name
(RefSeq) RNA-binding protein FUS-like
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shis03041
]
125195306
Spliceosome [BR:
shis03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
125195306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HABP4_PAI-RBP1
Stm1_N
Nucleocap_ssRNA
Motif
Other DBs
NCBI-GeneID:
125195306
NCBI-ProteinID:
XP_047949432
LinkDB
All DBs
Position
6:38865863..38873143
Genome browser
AA seq
723 aa
AA seq
DB search
MATINPFDLLDDDTEDPSLLAAQLKIEPKKAVVPPAKQPPQPKLPSKPLPPAQAVREAKA
ESARGGRGGGRGFGRGRGGHNREGASNGNSYGNREFSAPQGAPDKDGNSYERRGGYGAPR
GSFRGGRRGGYTNGEAGEEVERPRRTFDRRSGTGRGNEMKREGSGRGNWGAPEDELAPST
EEAVDGDEKNLNVEKPPVEENTAVDGEKEAAKDENEEKEAEDKEMTLEEYEKVLEEKRKA
LVALKTEARKVDGKEFASMQQLTDKKANDEVFIKLGSENEKKKDLAEKEQKAKKSVSINE
FLKPAEGERYHNPGGRGRGRGRGPRGGGYVGSNDRSGFQAPAIEDPGQFPTLGGKQGFAW
FCCEMATINPFDLLGDDTEDPSLLAAQQKIEQKKTIAPPPKHAVQPKLPSKPVPPAQAVR
EAKYDSARGGGRGRGRGYARDGGARPNRDFANNENSYGNKEVFAAQGAPDEVDGRSSERR
GGGYGGPRGSFSGGRRGGYSNGDSGEGDRDRTRRPLERRSGTGRGTEMKREGSGRGNWGM
HTDELAQVTEEVGNEDEKNLNVEKPLGEEDAAENVEKEGTKEENEEKPEDKEMTLEEYEK
LLEEKRKALLGLKSEERKVDAKEFESMQALSNKKANDDIFIKLGSEKDKKKELAEKEERA
KKAVSINEFLKPAEGEKYYSPGGRGRGRGRGGRGGGFGGPSDRNTFQAPAIEDPGQFPTL
GGK
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggcgactataaacccgtttgatttgctggacgatgatacagaggatccctcgctgctt
gctgctcagctcaagatcgagccgaagaaagccgtagtaccaccggccaagcagccaccg
cagccgaagctcccatcgaaaccgctccccccggctcaggctgtcagagaagcaaaagct
gaatctgcacgaggtggccgtggtggtggtcgtggatttggccgtggtcgtggaggacac
aatagagagggtgccagcaatggaaattcatatggcaatagggagttctctgctcctcag
ggtgcacctgacaaggatgggaattcttatgaaaggcggggtggctatggagcaccccgt
ggttctttccgtggtggacggagaggtggttacaccaatggagaagctggagaagaagtg
gagcgccctcgaaggacatttgatcgccgtagtggaactggtcgtggaaatgagatgaaa
cgggaaggatctggtcgtggaaactggggagcacctgaagatgaacttgcaccatcgact
gaggaagctgttgatggagatgagaaaaacctgaatgtggagaagccccctgtggaggaa
aacactgcagtagatggagaaaaggaagctgctaaagatgaaaatgaagagaaagaggct
gaggataaggagatgacattggaagaatatgagaaggttctggaggagaaaaggaaggct
ctggttgctcttaaaactgaagcaaggaaggttgatggaaaagagtttgcctcaatgcaa
cagctcacagacaagaaagctaatgatgaagtcttcattaaattgggttccgagaatgag
aaaaagaaagatttagcagagaaagaacaaaaagctaaaaagtctgtcagcatcaatgaa
ttcttgaagcctgctgagggagagaggtaccacaaccctggtggccgtgggaggggccga
ggccgtggaccaagaggtggaggctatgttgggtccaatgacaggagtggtttccaagca
ccagccattgaagatcccgggcagttcccgaccttgggtggcaaacaaggttttgcttgg
ttttgttgcgagatggcgacaataaacccgtttgatcttctgggtgacgataccgaggac
ccctcactcctcgcggctcagcagaagatcgagcagaagaaaaccatagcaccaccgccc
aagcatgcagtgcagccgaaactcccctccaagccggtacccccggctcaggctgtccga
gaggcaaaatacgattctgcccgaggaggtggacgaggtcgaggacgtggatatgctcgt
gatggtggtgcacgtcccaatagagactttgccaacaatgaaaactcatatggcaataag
gaagtatttgctgctcagggtgcacctgacgaggttgatggaagatcatctgaaaggcgt
ggcggcggctatggtggaccccgtggttcattttctggtggccgtcgaggtggttacagc
aatggagattctggggaaggagaccgagaccgcactcgtaggcctctcgagcgccgtagt
ggaactggccgtggaactgagatgaaacgagaagggtcaggtcggggaaactggggaatg
catactgatgaattggcacaagtgactgaggaagtcggtaatgaagatgagaaaaatctg
aatgtggagaagcccttgggagaggaagatgctgctgaaaatgtagaaaaggaaggtact
aaagaggaaaatgaagagaagcctgaggataaggagatgacactggaagagtatgagaag
cttctcgaggagaaaaggaaggctttgcttggtcttaaatctgaggaaaggaaggtcgat
gcaaaagaatttgaatcaatgcaagcactctcaaacaagaaagctaatgatgatatcttc
attaaattgggctccgagaaggataaaaagaaagagttggcagagaaagaagagagagct
aaaaaggctgtcagcatcaatgaattcttgaaacctgctgagggggagaagtactacagc
cctggcggtcgtggacgaggtcgtggccgtggcggcagaggaggaggcttcggtgggcca
agtgacaggaacactttccaagcaccagccatcgaagaccctgggcagttccctaccttg
ggtggtaaatga
DBGET
integrated database retrieval system
