Salvia hispanica (chia): 125195657
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Entry
125195657 CDS
T09851
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 23-like isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
shis01002
]
125195657
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shis04121
]
125195657
Enzymes [BR:
shis01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
125195657
Peptidases and inhibitors [BR:
shis01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
125195657
Ubiquitin system [BR:
shis04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
125195657
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
DUF7351
Motif
Other DBs
NCBI-GeneID:
125195657
NCBI-ProteinID:
XP_047949757
LinkDB
All DBs
Position
6:28562878..28569483
Genome browser
AA seq
1012 aa
AA seq
DB search
MTATETMIRSNGAAPHEPESDSALFHRSIDFHQARKHYNGFGNESCSDFKLVTLNPTSGG
LKSCGLEKITEKSSEFSEAGLDPELSFEITFRRIGAGLRNLGNTCFLNSVLQCLTYTAPL
AAYLQSGKHQNSCRTAGFCALCAIQKHVSRALQSSGRILEPKDLVSNLRCISRSFRNARQ
EDAHEYMVNLLESMHRCCLPSGVPSESPSAYEKSLVHKIFGGQLRSQVKCMQCSHCSNKF
DPFLDLSLEIHKSDSLYKALDHFTSRELLDGGAREYQCDQCKEKVKASKQLTVQKAPQVL
AVHLKRFSSYAPGQKVDKRVAFEPTLDLKPFVSDPYDGDLKYTLYGVLVHYGWSTHSGHY
YCFVRTSSGMWYSLDDNQVVQVNERKVLEQKAYMLFYVRDRKDIGRKNHVNTFQQDKDNM
VMNAIGNVAYSNLNMELKEKIQIGSNERELNGSSALSGRIAPATDLPNGKLTVEPLDLAI
NAKCASMKPPTKSQLKEDSPVELNSSVNGSGDASSGGYVATCHNILSVVEEHSTSSIVLS
VAMPADCKDNNKVKPSESAQKALDSAVLSRLSGDQCKMDAPVSETNASTKSLPMGANDEP
EKNICDGRAPVSSCIDASSMKAVGPNTDITVENGQRLDVQSKVSNLPAATTEPGSYCIEA
STMKADGPNTDATVENGQRLDVQSKLSNLPAATTEPVSSCIEASTMKAVGPTTDVTVANG
QRMDVQSKLSNLPSATTEPVRLRITKKKSQDLKVKWKLMKYQAVATSLSSNIVLGVGLCL
KNKKHKKHKKKLKKTHSSILKKSPGLKVILIENALPSKVGQPASVEAIPPAVDQSTCSRT
KKGKRVSDGQNHNPSIQNTISDSSILSAAIDKDFRERILLDGFTVSAGKQLDTRHSTAQG
TGISQEHQRELRQNDIMNMLTRGLDETTVGRWNNNGAALSTKSKTRAPGTVQIGYIGDEW
DEEYDRGKRKKIRVPAVSFDGPNLFQEIADKRLKTKRSKLERSRDGNQPFRI
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgacggcgacggagacgatgatcaggtcgaacggggcggccccccacgaaccggaatcc
gactcagcgctgtttcataggagtattgatttccatcaggcgaggaagcattacaatggg
tttggaaacgaaagctgcagtgattttaagctggtgacgctgaaccctacatccggaggg
ctcaagtcttgcggtttggaaaagataaccgaaaaatcatcggaattttctgaggctggg
ttggatcctgagctcagtttcgagattacgttccgcagaattggtgcaggtttgcgtaac
ctcggaaacacttgtttccttaattcagtactgcaatgtctgacctatactgcaccatta
gccgcctatcttcaaagtgggaagcatcaaaattcttgtcgtactgcggggttctgtgcg
ttgtgtgctatccagaaacatgttagccgagctctgcagtcaagtgggagaattctagag
cccaaggatcttgtttcgaacttaagatgcatatctcggagttttcgaaacgccaggcaa
gaagatgcccatgagtatatggtgaatttgcttgaatcaatgcacaggtgctgcttaccc
tctggagtgccaagtgaatctcctagtgcgtatgagaaaagcttagtccacaagatattt
ggtggccaattgcgtagtcaggtgaaatgcatgcagtgctcccactgctcaaacaaattt
gatccattcttggatctaagtctagaaatacataaatcagactcattgtataaagcactt
gatcatttcaccagcagagaactgttagatggaggtgctagggaatatcagtgtgatcaa
tgtaaggagaaagtaaaggcttccaagcaactaacagttcaaaaggcaccccaagtactt
gctgttcacctgaagcgttttagttcatatgctcctggccaaaaagttgataaaagagtt
gcttttgaacctaccttggacttaaaacctttcgtctctgacccctatgatggggatcta
aaatacactctgtatggagttcttgttcattatggttggagcactcattctggccattat
tactgctttgttcgcacatcaagtggcatgtggtattcccttgatgacaatcaggttgtc
caagttaatgagaggaaagttctggaacagaaggcctatatgcttttctatgttcgtgat
aggaaagacattggtagaaagaatcatgttaatacctttcagcaagataaagataacatg
gtgatgaatgctattggaaatgtagcatattcaaatttgaacatggaattgaaagagaaa
atccaaattggctcaaatgagagagagttaaatggctcgtcagctttatccgggaggata
gcaccagcgacagatctacctaatggcaagttgacagtggagcctttagaccttgcgata
aatgccaagtgtgcatcaatgaagccaccaacaaagtctcagctgaaggaagattctcca
gtggaattaaattcaagcgttaatggttctggtgatgcttcaagtggaggttatgttgca
acctgccacaacatcttgagtgttgtagaagagcatagtacaagttctattgtattatct
gttgccatgccggcagactgcaaggataacaacaaggtaaaacctagcgaatcagctcag
aaggcactggacagcgctgtgctcagcagattatctggagatcaatgcaaaatggatgcc
cccgtttctgaaacgaatgctagcaccaaaagtttgcccatgggagcaaatgacgaacca
gagaaaaacatttgtgatgggcgggcacctgtctcttcttgcattgatgcttcctccatg
aaggccgtaggtccaaatactgatataactgttgaaaatgggcaaagactggatgtgcag
tccaaggtatcaaacttacccgcagccaccacagaacctggctcctattgtattgaagct
tccaccatgaaggctgatggtccaaatactgatgcaactgttgaaaatgggcaaagactg
gatgtgcagtccaagttatcaaacttacctgcagccaccacagagcctgtctcctcttgc
attgaagcttccacaatgaaggctgttggtccaactactgatgtaactgttgcaaatggg
caaagaatggatgtgcaatccaagttatcaaacttaccttcagccaccacagagcctgtc
agactcaggataactaagaagaaaagccaggatcttaaagtaaaatggaagctcatgaag
tatcaggcagttgccacatcactcagctcaaacattgtattaggtgtgggcctctgctta
aaaaataaaaagcacaagaagcacaagaagaaactgaagaaaacgcatagttctatactg
aagaagtctcctggtctgaaggttatcttgattgagaatgccttaccatcaaaggtgggg
caacctgcgtcagtagaagcaattcctcctgctgttgaccaatctacctgctctcgtaca
aaaaaaggcaaacgtgtttcagatgggcaaaaccacaacccaagcatacaaaacactatt
agtgatagtagcatattaagtgctgctattgataaggatttcagagagagaattcttctc
gatggattcacagtttctgctggaaagcagcttgatacaaggcactctactgctcaagga
actgggatatctcaagagcaccaaagagaattgaggcaaaatgatatcatgaacatgctt
accaggggcttagatgagacaaccgttggtcgctggaacaataatggtgctgcactatct
actaaatctaaaacaagagcacctgggactgtgcagatcggttatattggggatgaatgg
gatgaggagtatgacagaggaaagagaaagaagataagggttcctgctgttagctttgat
ggaccaaatttgttccaagaaattgcagacaaaagattgaaaacaaagagatcgaagctg
gagagatccagagatgggaaccagccatttaggatatga
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