Salvia hispanica (chia): 125195725
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Entry
125195725 CDS
T09851
Name
(RefSeq) cryptochrome-1-like
KO
K12118
cryptochrome 1
Organism
shis
Salvia hispanica (chia)
Pathway
shis04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
125195725
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Motif
Pfam:
FAD_binding_7
DNA_photolyase
Cryptochrome_C
Motif
Other DBs
NCBI-GeneID:
125195725
NCBI-ProteinID:
XP_047949865
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Position
6:complement(14989890..14992471)
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AA seq
675 aa
AA seq
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MGIPGGGCSIVWFRRDLRVEDNPALAAGMRAGAVVAVFVWAPEEEGHYFPGRVSRWWLKN
SLSHLDSSLRSLGTPLLTKRSTDSVSSLLEVVKLTGAGQLFFNHLYDPISLVRDHRVKEV
LTAEGVTVRSFNADLLYEPWEVLDQDGRPFNTFSGFWDRCLSMPYDPEAPLLPPKRIFPG
DVSRCNPDTLIFEDESEKGSNALLARAWSPGWSNADKALTTFLNGPLIEYSKNRRKADSA
TTSFLSPHLHFGEVSVRKVFHLVRIKQVLWANEGNKAGEESVNLFLKSIGLREYSRYMSF
NHPYSHERPLLGHFKYFPWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVV
SSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYITGTLPDGRAFDRLDNLQIEGYK
FDPNGEYVRRWLPELSRLPTEWIHHPWNAPESMLQAAGIELGSNYPLPIVEIDAANARLE
EALAQMWQQEGASQTAIENGMEEGLGDSSEYTPIAFPPNTDMEMDNEPIRNNPPNAVIRR
YGDQMVPSMTSSFIRVADEETSVDLRSTGDDNRAEVPSNVNPAEEPRRERRGQAIIQTGR
TNDGFLQSNFARGRRNSEDSTAESSSTTRRERDGGIVPVWSPSNSTYSDPFRGEENSIST
SSSYLARHPQAHQLF
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgggaattcccggaggtggatgtagtatagtttggttcaggagagatctccgggtggaa
gataatccggcgctggcagcggggatgagggccggggcggtggtggctgtgtttgtttgg
gcgccggaggaggaggggcactacttccctggtagggtctctagatggtggctgaagaat
agtttatcacaccttgatagctctttgaggagccttggcactcccctcctcactaagaga
tccactgatagtgtttcttctcttcttgaagttgtcaaattaactggtgctggccagctg
tttttcaaccatttatatgatcctatatcacttgtaagggatcaccgggtaaaggaagtc
ttgactgctgaaggcgttactgtccgttccttcaatgcagacttgctctatgaaccatgg
gaagttcttgaccaggacggtcggccattcaatactttctcaggattctgggacagatgc
ctcagtatgccgtatgatcctgaagctcctctcctcccgcctaaaaggatttttcctggt
gatgtgtcgagatgcaatcctgacactttaatatttgaagatgagtcagagaaaggaagc
aatgcccttctcgctcgggcatggtcccctggctggagcaatgccgataaagccctaaca
accttcttaaatggacccctaatagagtactccaagaatcgtcgaaaggctgatagtgcc
acaacctcttttctatccccccatttgcattttggggaagtcagtgttcgtaaggttttc
catcttgttcgcattaagcaagttctttgggccaatgaaggtaacaaagcaggtgaagag
agtgttaatttgttcctcaaaagtatagggctgagggagtattccagatacatgagtttc
aatcatccttacagccatgaaaggccgttacttggccacttcaagtatttcccttgggtt
gtggacgagggctacttcaaagcatggagacaaggccggactggatatcctttggtggat
gctggtatgagggagctatgggccactggatggctacatgatcggatacgtgttgtagtc
tcgagtttctttgtcaaagttctgcagctgccttggagatggggaatgaagtacttctgg
gataccctactggatgcagatcttgagagcgatgcccttggttggcaatatatcactgga
acacttccagatggtcgagcgtttgaccgccttgataacctacagattgagggttacaag
ttcgatccaaatggagaatatgttcgaagatggcttcctgaactttctagattgccgaca
gagtggatacatcatccatggaatgcgccagaaagtatgctacaagctgccggaatcgaa
cttggttcgaattaccctcttcctatagtcgaaatagatgctgcaaacgctaggttggaa
gaagcacttgcacaaatgtggcagcaggaaggggcttcacaaactgcaatcgagaatgga
atggaagagggccttggagactcatccgaatacactcctattgcattccctccgaataca
gacatggagatggacaatgaacctatcagaaacaatcctccaaatgcagtcattcgccgc
tatggggatcaaatggtaccaagcatgacctcttctttcatccgcgttgcagatgaagag
acgtcagttgatctcagaagcacaggcgatgataatagagctgaggtcccttcaaatgta
aaccctgcagaggagccgagaagagaacgacgcggccaagctataatccagacaggtaga
acgaatgatggtttcctacaatccaatttcgcaagaggtcgtagaaattctgaagattca
acagcagagtcatccagtaccactagaagagagagagacggcgggattgtcccagtttgg
tccccttcgaattccacgtactctgatccattccgaggtgaagagaacagcattagcacc
agttcgtcttacttggctaggcatccacaggctcaccagctattctga
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