KEGG   Salvia hispanica (chia): 125195725
Entry
125195725         CDS       T09851                                 
Name
(RefSeq) cryptochrome-1-like
  KO
K12118  cryptochrome 1
Organism
shis  Salvia hispanica (chia)
Pathway
shis04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:shis00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    125195725
SSDB
Motif
Pfam: FAD_binding_7 DNA_photolyase Cryptochrome_C
Other DBs
NCBI-GeneID: 125195725
NCBI-ProteinID: XP_047949865
LinkDB
Position
6:complement(14989890..14992471)
AA seq 675 aa
MGIPGGGCSIVWFRRDLRVEDNPALAAGMRAGAVVAVFVWAPEEEGHYFPGRVSRWWLKN
SLSHLDSSLRSLGTPLLTKRSTDSVSSLLEVVKLTGAGQLFFNHLYDPISLVRDHRVKEV
LTAEGVTVRSFNADLLYEPWEVLDQDGRPFNTFSGFWDRCLSMPYDPEAPLLPPKRIFPG
DVSRCNPDTLIFEDESEKGSNALLARAWSPGWSNADKALTTFLNGPLIEYSKNRRKADSA
TTSFLSPHLHFGEVSVRKVFHLVRIKQVLWANEGNKAGEESVNLFLKSIGLREYSRYMSF
NHPYSHERPLLGHFKYFPWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVV
SSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYITGTLPDGRAFDRLDNLQIEGYK
FDPNGEYVRRWLPELSRLPTEWIHHPWNAPESMLQAAGIELGSNYPLPIVEIDAANARLE
EALAQMWQQEGASQTAIENGMEEGLGDSSEYTPIAFPPNTDMEMDNEPIRNNPPNAVIRR
YGDQMVPSMTSSFIRVADEETSVDLRSTGDDNRAEVPSNVNPAEEPRRERRGQAIIQTGR
TNDGFLQSNFARGRRNSEDSTAESSSTTRRERDGGIVPVWSPSNSTYSDPFRGEENSIST
SSSYLARHPQAHQLF
NT seq 2028 nt   +upstreamnt  +downstreamnt
atgggaattcccggaggtggatgtagtatagtttggttcaggagagatctccgggtggaa
gataatccggcgctggcagcggggatgagggccggggcggtggtggctgtgtttgtttgg
gcgccggaggaggaggggcactacttccctggtagggtctctagatggtggctgaagaat
agtttatcacaccttgatagctctttgaggagccttggcactcccctcctcactaagaga
tccactgatagtgtttcttctcttcttgaagttgtcaaattaactggtgctggccagctg
tttttcaaccatttatatgatcctatatcacttgtaagggatcaccgggtaaaggaagtc
ttgactgctgaaggcgttactgtccgttccttcaatgcagacttgctctatgaaccatgg
gaagttcttgaccaggacggtcggccattcaatactttctcaggattctgggacagatgc
ctcagtatgccgtatgatcctgaagctcctctcctcccgcctaaaaggatttttcctggt
gatgtgtcgagatgcaatcctgacactttaatatttgaagatgagtcagagaaaggaagc
aatgcccttctcgctcgggcatggtcccctggctggagcaatgccgataaagccctaaca
accttcttaaatggacccctaatagagtactccaagaatcgtcgaaaggctgatagtgcc
acaacctcttttctatccccccatttgcattttggggaagtcagtgttcgtaaggttttc
catcttgttcgcattaagcaagttctttgggccaatgaaggtaacaaagcaggtgaagag
agtgttaatttgttcctcaaaagtatagggctgagggagtattccagatacatgagtttc
aatcatccttacagccatgaaaggccgttacttggccacttcaagtatttcccttgggtt
gtggacgagggctacttcaaagcatggagacaaggccggactggatatcctttggtggat
gctggtatgagggagctatgggccactggatggctacatgatcggatacgtgttgtagtc
tcgagtttctttgtcaaagttctgcagctgccttggagatggggaatgaagtacttctgg
gataccctactggatgcagatcttgagagcgatgcccttggttggcaatatatcactgga
acacttccagatggtcgagcgtttgaccgccttgataacctacagattgagggttacaag
ttcgatccaaatggagaatatgttcgaagatggcttcctgaactttctagattgccgaca
gagtggatacatcatccatggaatgcgccagaaagtatgctacaagctgccggaatcgaa
cttggttcgaattaccctcttcctatagtcgaaatagatgctgcaaacgctaggttggaa
gaagcacttgcacaaatgtggcagcaggaaggggcttcacaaactgcaatcgagaatgga
atggaagagggccttggagactcatccgaatacactcctattgcattccctccgaataca
gacatggagatggacaatgaacctatcagaaacaatcctccaaatgcagtcattcgccgc
tatggggatcaaatggtaccaagcatgacctcttctttcatccgcgttgcagatgaagag
acgtcagttgatctcagaagcacaggcgatgataatagagctgaggtcccttcaaatgta
aaccctgcagaggagccgagaagagaacgacgcggccaagctataatccagacaggtaga
acgaatgatggtttcctacaatccaatttcgcaagaggtcgtagaaattctgaagattca
acagcagagtcatccagtaccactagaagagagagagacggcgggattgtcccagtttgg
tccccttcgaattccacgtactctgatccattccgaggtgaagagaacagcattagcacc
agttcgtcttacttggctaggcatccacaggctcaccagctattctga

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