Salvia hispanica (chia): 125195746
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Entry
125195746 CDS
T09851
Name
(RefSeq) probable alpha-mannosidase At5g13980 isoform X1
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
125195746
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shis04131
]
125195746
Enzymes [BR:
shis01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
125195746
Membrane trafficking [BR:
shis04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
125195746
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38N
Glyco_hydro_38C
Alpha-mann_mid
Laman-like_dom
Glyco_hydro38C2
Motif
Other DBs
NCBI-GeneID:
125195746
NCBI-ProteinID:
XP_047949897
LinkDB
All DBs
Position
6:complement(33815829..33823569)
Genome browser
AA seq
1011 aa
AA seq
DB search
MAAFGVLAVVFSVYCMCFLVEGTYMVYNTSGGVVPGKINVHLVPHTHDDVGWLKTVDQYY
VGSNNSIQVACVQNVLDSLIPALLADKNRKFIYVEQAFFQRWWRQQSDGMKDTVKVLVSS
GQLEFINGGMCMHDEAATHYIDMIDQTTLGHWYIKRDFNVTPRIGWQIDPFGHSAVQAYL
LGAEVGFDALYFARIDYQDRAKRSAEKNLEVIWQGSKSRGSSSQIFTGAFYAGNYEPPTG
FYYEVNDDSPIVQDDIELFDYNVQERVDAFVAAAYFQANVTRSNHIMWTMGTDFKYQYAH
TWFRNTDKLIHYVNQDGRVNAFYSTPSIYTDVKHALDEPWPLKSDDFFPYADRENAYWTG
YFTSRPTSKGYIRVLSGYYLAARQLEFFVGRNKSGLTTDSLADALAIAQHHDAATGTEKQ
HVADDYAKRLSIGYEESKDVVAASLGCLTQSPLSSECKISITNFNQCPLLNISYCPATEI
DLSVGKKLAVLVYNPLGWKRTSVVRIPVINENLSVSDSAGKLILSQLLPIVNASVSTRKF
YASAYTGESPSFVPKYWLAFTAVVPPLGFSTYVISSGQSSATTELIPNTVGTGGIEVGSG
NLKLIYSGKDGKLMKYINLRNSVNVSLEQSYTYYVGSTDELQASGAYVFRPNGTHTIQSE
EKIPLTVYRGPLYDEVHQTFSSWVHQTTRVYKEKEHAEIEFTVGPIPIDDGNGKEIVTQL
KTMIGNNKTFYTDSNGRDFLERVRDYRADWDLQVDQPIAGNYYPINLGIYIKDTSTEMSV
LVDRSVGGSSIIDGKIEIMLHRRLLHDDGRGVAEALNETVCALDTCTGLTVQGKYYLRFD
PLGEGSKWRRSFGQEIYSPFLLAFSEQDDKWTNFPTPTFSAMDPSYSLPDNVAIITLQEL
QDGTVLLRLAHLYEVGEDKDLSSLATVELKRVFQNRKINKIKEMSLSANQERAEMERKRL
PWKVEGSNTESLSDLRGGPIDHEKLVVELAPMEVRTFILDFNSDIVPYNTR
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atggctgcatttggcgttttagcagtggtcttcagtgtgtactgtatgtgttttttggtg
gaggggacgtacatggtttacaacacctcgggaggcgttgttccagggaagattaatgtg
catttggttcctcacacgcatgatgatgttgggtggttgaagactgttgatcagtactat
gttggatcgaataactcaatccaggttgcatgcgtgcagaatgtgttggattcactgatt
ccagcgcttttggctgataaaaaccggaaattcatttatgttgaacaggcgttttttcag
cggtggtggagacagcagagtgatgggatgaaggatacggtcaaagtactagttagctcg
ggtcaacttgagttcataaatggtgggatgtgcatgcatgatgaggcagcaacacattac
attgatatgatagaccagacaacactaggccactggtacataaaacgggacttcaatgtc
actcctagaattggctggcagattgacccgttcggtcattctgctgtacaggcttacctt
ttgggagcagaggtgggatttgacgctctatactttgcacgtattgactaccaagataga
gccaagaggtctgctgagaagaaccttgaggttatctggcagggttcaaaaagtcgtggt
tcttcctcccagatatttactggtgctttctatgccggaaattatgagcctccaactggt
ttttattatgaagtcaatgatgattcccctatagtacaggatgacatcgagctgtttgat
tacaatgttcaagaacgtgtcgatgcctttgtagctgctgcctattttcaggctaatgtt
actcgttccaatcatataatgtggactatgggaacagatttcaaatatcaatacgcgcat
acgtggttcaggaatacggacaagctcatacactatgtgaatcaagatggccgcgtcaat
gccttctattcaactccatctatttacactgatgtgaaacatgctctggatgaaccgtgg
cctcttaaatccgatgacttcttcccgtacgccgaccgtgaaaatgcttactggactgga
tattttacaagtaggcctaccagtaaaggatatatcagagtgctgagtggctactatttg
gcagcaagacagttggagttctttgtaggaagaaataaatccggtcttacaaccgactcc
ttagctgatgctttggcaatagcacaacaccatgatgctgctacaggtactgagaagcag
cacgtggctgatgactatgcaaaacgactttcaataggttacgaggagtccaaggatgtt
gtagctgcttcccttggttgtctaactcaatcaccattgtcttcagaatgcaaaatttct
atcacaaacttcaaccagtgcccgctgctgaatataagttattgtcctgcaacagaaatt
gatctttccgtcgggaaaaaattagcagttcttgtttacaaccctctagggtggaaaaga
acatctgttgtcaggattcctgtcatcaacgagaatctctcagtatcagattctgctgga
aaattgattttatcgcagcttcttcctatagttaacgcttcagtatccacgagaaaattc
tatgctagtgcatatacgggtgaatccccttcattcgtccccaaatattggctcgctttc
acagcagttgttccgcctctgggttttagtacttatgtgatctcaagtggacaatcttct
gccacgactgaacttataccaaacaccgttggtactggtggcattgaagtcggatcaggc
aatttgaagcttatatactctggaaaggatggcaagcttatgaaatacattaacctcaga
aactcggtcaatgtctctctggagcaatcatatacttattatgttgggagtactgatgaa
cttcaggcttctggagcatatgtttttcggccaaatggcactcatacaatacagtctgaa
gaaaagattccactaacagtatatagggggccactctatgatgaagttcatcagacattt
agttcatgggtacatcagaccacaagagtttacaaggagaaagaacatgctgagattgaa
tttactgtcggacccatacccatagatgatgggaatggaaaagagattgtgactcaactc
aaaaccatgataggaaacaacaaaacattctatacagactcaaatgggcgtgattttctg
gaacgggttcgagactacagagctgactgggaccttcaagttgaccaaccaattgctgga
aattactacccaattaatcttggaatttacatcaaagatacgagcacagagatgtcagtt
ttggtggatagatcagttggagggtcaagtattattgatggcaaaatcgagataatgctg
cacaggaggttgcttcatgatgatggtagaggtgttgccgaggctctaaatgaaaccgta
tgtgcccttgatacatgcacgggtttgactgtccaaggaaagtactatctcagatttgat
ccactcggagagggatccaagtggcgtcgatcgtttggacaggagatatactcacctttc
ctcctggccttcagtgagcaggatgataagtggacaaatttcccaacaccaactttttcg
gccatggatccttcttacagcctacctgataacgtcgcaattataacactccaggaactt
caagatggcactgttctcctccgtttggcgcatttatatgaggttggagaggacaaggac
ttatctagcttggcaactgtggaattgaagcgggtttttcaaaatcggaagatcaacaaa
atcaaggaaatgagtctatctgccaaccaagaaagagcagaaatggaaaggaaaagatta
ccttggaaagtagaaggctccaacacagaatctctctctgatttgagaggtggtcctata
gatcatgagaagctggtggtcgagctcgcccccatggaagtgcggaccttcatcctcgac
ttcaactcagatattgttccatacaacacgaggtga
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integrated database retrieval system
