Salvia hispanica (chia): 125195845
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Entry
125195845 CDS
T09851
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18 homolog isoform X1
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
shis
Salvia hispanica (chia)
Pathway
shis03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125195845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shis03009
]
125195845
Ribosome biogenesis [BR:
shis03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
125195845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
EIF3I
RMC1_N
Beta-prop_TEP1_2nd
WD40_like
Beta-prop_EIPR1
Motif
Other DBs
NCBI-GeneID:
125195845
NCBI-ProteinID:
XP_047950058
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Position
6:complement(37522691..37525037)
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AA seq
568 aa
AA seq
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MSLISQNALTKEVGKKKKREMVKDKIELVEEEVGDGDKTVVDPTRNNKRKKGRKEEDDEQ
LEIEEGKERKKLESFLFSNLYSPVGFGKDDEEEEAREEVDNNSALFFTDRSADSTLSVYE
EDIESGDESADEQDNNERKPVWVDDEEKKTSINIAKINKLRKLRKGEDESVISGEAYESR
LRAQHMKMNRGTDWARPNSQPVYSSEDDDSDKESGVVVASGYERPEYADDVLRSNEDLVL
NRSVKLLPGLLEYSRLSDANMKDPSQGPINSVQFHKNAQLLLVGGLDRTLKFFQVDGKKN
EMIQSIFLEDCPIRKAAFLPDGSQAIISGRRKFAYSFDLIKAQVDKIGPLAGRDEKSLES
FEVSPDSKTIAFLGNEGCILLVSSKTKELIGTLKMNGSVRSVAFTNDGHQLLSSGGDGQI
YHWDLRTRLCFHKGVDEGCLTGTALSVPPVGNLFAAGSDSGIVNIYNRDEFIGGKRKPIK
VIENLTTKVDFMKFSPDAQILAISSRMKKNSMKLVHVPSLTVFSNWPPPNKAVHYPSCMD
FSPHGGFMAVGNAAGKVLLYKLHHYNRA
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgagcttaatttctcagaatgccctaactaaagaggtagggaagaagaaaaagagggag
atggtgaaagacaagattgaacttgtcgaagaagaggttggggatggagacaaaactgtc
gtggaccctacgagaaataataagagaaagaaagggcgaaaggaggaggatgacgagcaa
ttggaaattgaggaggggaaggagagaaagaagctcgaaagctttttgtttagcaactta
tactcaccggttgggtttgggaaggacgatgaagaagaagaagctagagaggaggtggac
aacaactctgcgttgttcttcactgataggtcagcagacagcacattgtctgtgtacgaa
gaggacattgagtctggagatgagagtgctgatgaacaggataacaatgagagaaaacct
gtgtgggttgatgacgaagagaaaaagactagtataaacatagccaagatcaacaaactg
cggaagctgaggaaaggagaggatgaaagtgtaatttctggtgaagcgtatgagtcgaga
ttgagagctcagcatatgaagatgaaccgaggtactgattgggcacgtcccaattctcag
ccagtgtatagttctgaagatgatgattctgacaaagaaagcggagtggtggtagccagt
ggttatgagcgtcctgaatatgctgatgatgtcctcaggtcaaatgaagatcttgttctg
aacaggagtgtgaaactattaccggggcttcttgaatactcgagattgtctgacgccaat
atgaaggacccttcccaaggtccaattaattctgtgcagttccacaagaatgcacagctg
ctccttgttggtgggttggatagaacattgaagttctttcaagtagatgggaagaaaaat
gagatgatccagagcatttttctggaggactgtcctattcgaaaggctgctttcttgcct
gatggatcacaggccatcatatcaggaaggaggaagtttgcttatagctttgacttaatc
aaagctcaagtagataagataggccctcttgcaggacgggatgagaagagcttggaatcg
tttgaggttagccctgattctaaaaccatcgcctttcttggaaacgaagggtgtattctg
ttggtgtcatcaaagacaaaagaactgattggtacgctgaagatgaatggaagtgttaga
tctgtagcattcactaatgatggacatcaattgttgagttcaggtggggatgggcagatt
tatcactgggatctgaggacaaggctgtgcttccacaagggcgtcgatgaaggttgtctg
actggtacagctttgtctgttcccccagttggtaatttatttgcagcaggttcagacagt
gggattgtgaacatctacaacagagatgagttcataggtgggaagagaaaacctataaaa
gttattgaaaacttgactactaaggtggatttcatgaaattcagtccggacgcacaaatt
ttggccatcagttctcgcatgaagaagaatagcatgaagctggttcatgtcccgtctcta
actgttttctcgaactggcctcctccaaataaggctgtgcactatccaagctgcatggat
ttcagccctcacggaggtttcatggctgtgggaaatgctgcgggaaaagtcttattatac
aagttgcatcactataatcgggcttag
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