Salvia hispanica (chia): 125195849
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Entry
125195849 CDS
T09851
Name
(RefSeq) two-component response regulator ARR2-like
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
shis
Salvia hispanica (chia)
Pathway
shis04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
125195849
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shis03000
]
125195849
Transcription factors [BR:
shis03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
125195849
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
125195849
NCBI-ProteinID:
XP_047950064
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Position
6:4479086..4483054
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AA seq
628 aa
AA seq
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MDLGVKSTPYTSSNASWKSGADAAPGQFPAGLKVLVVDDDPTCLRILEKMLKNCLYEVTT
CNRAEVALNFLRDHKNGCDIVISDVHMPDMDGFKLLECVGLEMDLPVIMMSADDSKHVVM
KGVTHGACDYLIKPVRIEALKNIWQHVVRKKQHELKDKDLEHSGSVEEGERQLKTYEDTD
CSHSANEGNWKNSKKRKDEEEDELEDRDDTSALKKPRVVWSVELHQQFVTAVNQLGIDKA
VPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSQHHNGLGSPFMGPTDAQFGQMSS
LNSVDLQALAASGHIPHHSLASIQAAALGRATSKSPMPLPLVDQRNVFNFENPKLRFPEG
QNESSSKQGNLLHGIPTNMDSKQLTSLHQSALGNMNMHMHSQTSQSSSLMMQMAQLRPQS
RPQNLNDINGSRNGVEVISRPQYISHPKPSTSTDFSSQGTEFSGNNTFPLPSNSVMSGAE
MKGSRAFLPNYDVLNNLNQSRNQEWRMQNAGSSFALLQNSSIQRGLDVSSSLGESRILAA
NKATLPIVEGRGNAPNVSQHLNFPAFDKSLRSKAERLPGMGFQNGLLHERFGQEDLMSAL
LKQQQEGMVAPVETEFGYDGYQLDNLPV
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggatcttggagtgaaatccacgccttatacaagctctaatgcttcttggaagtccggc
gccgacgccgctcccggccaatttccggcgggattgaaagttcttgttgttgatgatgac
cccacttgtttgagaatcttggagaagatgctcaaaaattgtttgtatgaagttacgacg
tgcaatcgagcagaggttgctctgaactttctccgagaccacaaaaatggctgtgacatt
gtgataagtgatgttcatatgcccgatatggatggtttcaagctcctcgagtgcgttggc
ctcgagatggatctgcctgttatcatgatgtctgcggatgatagcaaacatgtagtgatg
aagggtgttacacacggtgcttgcgactatctgattaagccggttcgtattgaggctttg
aagaacatatggcagcatgtagtccgtaaaaagcagcacgagttgaaggataaggatttg
gagcactcggggagtgtggaggagggggagcggcagctgaaaacctatgaagacactgat
tgctcccattcggcaaatgaagggaactggaaaaactcaaagaagaggaaggatgaggag
gaggatgagttggaagacagggatgatacatctgcattgaagaagccaagggttgtatgg
tccgttgagctccatcaacagtttgtaacggctgttaatcagcttggaatcgacaaggct
gttccaaagaaaatcctggaattaatgaacgttcctggccttacacgagaaaatgttgct
agccatctacagaaataccgcctctaccttagaaggctgagcggcgtatcacagcaccat
aatggtcttggcagcccgtttatgggacccacggatgcgcagtttggccagatgtcttct
ctcaacagtgtagatcttcaagctcttgccgcctctggtcacatccctcaccatagtctt
gcatcgatccaggcggctgcacttggccgggccacctcaaagtcgcccatgcctctacct
cttgtcgatcaaagaaacgtttttaactttgaaaatccgaagctgaggttcccggaaggt
caaaacgagagcagtagcaagcaaggcaacttactccatggaataccgacgaatatggac
tcaaaacagctaacctctctgcaccagtctgcgctcggcaacatgaatatgcacatgcat
tcccagacgagccagagcagctcgttgatgatgcagatggctcagcttcgaccgcagtcg
aggcctcagaatttgaatgatatcaatggaagcaggaatggagtcgaagtcatcagcagg
ccgcagtatatatctcatcccaagccatctacttccacggacttctcgagccagggcacg
gaattttcaggaaataataccttcccacttccaagtaattctgtaatgtcgggcgctgag
atgaaaggctcgagagctttccttcccaactacgatgtcctcaacaatctgaatcaaagt
aggaaccaagagtggcgcatgcagaatgctggatcgagctttgcacttcttcaaaactcg
agcatacaacgcgggttggatgtttcatcgtctcttggagaaagtaggatcttggctgct
aacaaggctaccctcccgattgtagagggacgtggcaacgcaccaaacgtctcccagcac
ctcaacttcccggcttttgacaaatcattaaggagcaaggcagaaagactacccggaatg
ggcttccaaaatggcctcttgcacgaacgtttcggccaggaggacctcatgagcgcactt
ctaaagcagcagcaagaaggcatggttgccccggtcgagacagagttcggttacgatggc
taccagttggataacctccccgtgtaa
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