Salvia hispanica (chia): 125195857
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Entry
125195857 CDS
T09851
Name
(RefSeq) ubiquitin domain-containing protein DSK2b-like
KO
K04523
ubiquilin
Organism
shis
Salvia hispanica (chia)
Pathway
shis04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125195857
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shis04131
]
125195857
03051 Proteasome [BR:
shis03051
]
125195857
Membrane trafficking [BR:
shis04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
125195857
Proteasome [BR:
shis03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
125195857
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
Rad60-SLD
UBA
STI1-HOP_DP
Ubiquitin_2
UBA_7
UBA_NBR1_C
Dsc3_N
XPC-binding
RAWUL
Rad60-SLD_2
UBA_HOIP
Fungal_trans_2
Ubiquitin_5
RPN13_C
DUF7918
Motif
Other DBs
NCBI-GeneID:
125195857
NCBI-ProteinID:
XP_047950071
LinkDB
All DBs
Position
6:22231607..22236110
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AA seq
540 aa
AA seq
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MAADADSTAGVAAIQDVNVYIRCSNGSKFSVKTTLDSTVAEFKHVLAHNCDVPAEQQRLI
YKGRILKDDQTLASYGLQADHTIHMVRGSAPAAASSPAPVPTGAGNTNTNAATQGGGVNP
GGTGVAGTGASLFPGLGLGGLGGTGGASGLFGAGLPEFEQVQQQLTQNPNMMRDIMNMPA
IQSLMNNPEIMRSLIMSNPQMREIIDQNPELAHILNDPSVLRQTLEAARNPELMREMMRN
TDRAMSNIESSPEGFNMLRRMYENVQEPFLNATTIGGNAGSDTGSNPFAALLGNQGGLQT
RDGANSTSATETGTAVPNVNPLPNPWSNTGGSQTTNANRPNLTGDTRPPPITGLGGLGLP
DLERTGMSDPAAFGQLLQNPAVSQMMQNLLSNPQNMEQLMGLNPQLRSMLDTNPQLREMM
QNPELIRQLTSSDMLQQMMALQQQLTRLRSTPDGDQTNQNRGTQNNMGLDMLMNMFGGLG
AGGFAVPNAPDGPPEEVYATQLSQLQEMGFFNTEENIQALRATSGNVHAAVERLLGSLGQ
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgatgcggactccactgcgggggttgcggcgattcaggacgtgaacgtatac
atccgatgctcaaacggctctaaattttcggtgaaaaccaccctcgattcgacggtcgca
gaattcaaacatgttttggcgcacaattgcgatgttcctgctgaacaacagcgcttgatc
tacaagggccggatcttgaaagatgaccaaaccctagctagttatggtttgcaggcagat
cacactattcacatggttcgtggttctgcaccagctgctgcatcttctcctgctcccgtt
cctactggtgctgggaacaccaacactaatgctgcaactcagggtggtggtgtgaatccc
gggggtactggggtggctggtacgggtgcatccttgtttccagggcttggcttaggtgga
ctaggtggtactgggggggcatctggattatttggagccggacttccagaatttgaacag
gtgcagcaacaactaactcaaaatcctaacatgatgagggacataatgaacatgcctgcc
attcagagtttgatgaacaaccctgagattatgcgcagcctaattatgagtaaccctcaa
atgcgtgagataattgatcagaaccctgaacttgctcacatattgaatgatcctagtgtc
cttcgacaaacattagaagcagcaaggaaccctgagctaatgcgtgaaatgatgcgaaac
actgacagagcgatgagcaacattgaatcgtctcctgagggattcaatatgctcaggcgc
atgtacgaaaatgtgcaagaacccttcctgaatgcaacaaccataggtggtaatgctgga
tctgatactggatctaatccatttgcagcactcctggggaaccaaggggggttacaaact
agagatggagctaattcaacaagtgcaactgaaacaggaacagctgttccaaatgtcaat
ccacttcccaatccatggagcaatactggaggttctcaaacaaccaatgctaacagacct
aatctaactggtgatacgaggccacccccaattactggactgggaggacttggtcttcct
gatttagagcgcacaggcatgagtgatcctgctgcatttggtcagctgttgcaaaatccg
gctgtgtctcagatgatgcagaacttgctttcaaaccctcaaaacatggaacaactcatg
ggtttgaatcctcaactgcgaagcatgcttgacacgaaccctcaattaagagaaatgatg
caaaacccagaacttattcgacagttgacctcatctgatatgttgcagcaaatgatggct
ttgcagcaacaacttactcggctgcggtcaaccccggatggagaccagactaatcaaaat
agaggaacacaaaataatatgggtttggacatgctgatgaatatgttcggtggacttgga
gctggtggctttgctgttcctaatgcccctgatgggcccccagaagaagtgtatgcaact
cagctatcacaactacaagagatgggtttcttcaacacagaagaaaacatccaagcactc
cgtgccacttcaggaaatgtgcatgcagctgttgaacgacttctaggaagcctggggcaa
tag
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integrated database retrieval system
