Salvia hispanica (chia): 125195965
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Entry
125195965 CDS
T09851
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
125195965
Enzymes [BR:
shis01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
125195965
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
NA-iREase2
CarboxypepD_reg
Endotoxin_C
Motif
Other DBs
NCBI-GeneID:
125195965
NCBI-ProteinID:
XP_047950233
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All DBs
Position
6:36514529..36517682
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AA seq
632 aa
AA seq
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MSKSNVTLSVSGSNIIIDNGLIRLTIMKPQGLLTAIKYAGIDNLLDTKSNQLNRGYWDIN
WNLPGGQDRYLLLRGSEYSVISLSNDNLEVSFKSSYDPSVSGTRLPLTIDQRYIVRSGVS
GFYCYAIYERPQGCPPFDLAQTRMVFKLQRDRFHYMAITDWKQRVMPMPEDLLPGRGKTL
IVPESVLLVNPINPDLKGEVDDKYQYSMDNKDGGVHGWISSNPSVGFWIIFPSHEFRNGG
PTKQNLTCHTGPTCLAMLHGSHYIGNDMVAHFEQGEVWRKVFGPFFVYLNATKDVSQSYN
LWTDAKKQRLMEESLWPYDFISSPYYLTSKERGSATGRLFVQDRYISDSLIPAKSAFVGL
SVATTAGSWQTESKDYQFWVQTDLDGNFSIKNVVPGVYGLHGWVPGVIGDYLYHQLVTIS
QGIETEVGDVIYAPIRDGPTLWEIGYPDRTAATYYVPDVNPIYVNKLFINTPEKYRQYGL
WDRYTDLNTKNDQIFTIGVSDARKDWFFAHVDRRNGNGKYVPTTWEIRFYLKSVAAGIYK
LRLAIASATRSDLEIHVNQMNGEQLVFQVTNLGADNAVCRHGIHGLYQLFSVDISSALLI
NGDNSMFLTQARAGDALCGILYDYIRLEAPPT
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagagcaatgtaactctatctgtcagtggctccaacattataattgacaatgga
ttgatacggcttacaataatgaaaccacaaggactgctcacagccataaagtatgctgga
atagacaacttattagacaccaaatccaaccaacttaacagaggttactgggacatcaac
tggaacttgccaggaggccaagacagatacctattgctaaggggatccgaatatagcgtg
atcagtttgagcaacgataatctggaggtctcgtttaagtctagctatgacccttcggtt
agtgggacaaggcttcccctaactatagatcaaaggtacattgtaaggagtggagtttcg
ggtttctactgctacgccatctacgagcgccctcagggttgcccccccttcgaccttgct
caaacacgcatggtgtttaagctgcaacgcgacaggtttcattacatggcaatcacggat
tggaaacaacgcgtgatgccaatgccagaggatctactgccaggcagaggcaaaacgctg
attgtgcccgagtctgtattgcttgttaatccgatcaatccggaccttaaaggagaggtt
gacgacaaataccaatattcgatggacaacaaggatggtggagtccatggatggataagc
tccaaccccagtgtgggattctggatcatcttccctagccatgagttccgcaatggtgga
cccaccaagcaaaatctcacgtgccataccggtccaacctgccttgctatgttacatgga
agtcattacattgggaacgacatggttgctcactttgaacaaggtgaagtatggagaaag
gtgttcggccccttcttcgtttacctcaacgccactaaagatgtctcccaatcttacaat
ctatggacagatgcaaagaaacagaggttaatggaggagtcgttatggccgtacgatttc
atctcatcgccatactatctgacgtccaaggagcgcggctctgctacaggaagactcttt
gtccaagatagatatatttcagattcgcttattcctgcgaagtctgcctttgttgggcta
tcagttgcaacaacggccggttcttggcaaactgaaagcaaggattaccaattctgggtg
caaacagatttagatggaaacttcagcataaaaaatgttgtgccaggagtttatgggctt
catggttgggttccaggtgtgattggtgattacctgtaccatcaacttgtcactatctct
caaggaatcgaaacagaggtaggtgatgtaatctatgcgcccataagagatgggccaact
ctatgggagattggttatccagatcgcactgcagctacatattatgtgcctgatgtcaat
cccatctatgttaacaaattgtttatcaacacccctgaaaaatacagacaatatggacta
tgggatagatacacagacctaaataccaagaatgatcaaatcttcactataggggtgagt
gatgcaaggaaagactggttctttgctcatgtcgataggaggaatggaaacggtaaatat
gttccgacaacgtgggagatcagattctacctaaaatcggttgctgccggaatttacaag
ttgagattggctattgcctcagctacccgctccgacttggagattcatgttaatcaaatg
aatggtgagcagctagtgttccaagtgacaaatttgggcgccgataatgcagtttgtcgg
catggaatccatggactataccagcttttcagtgttgatatatcatcagcattgttgatc
aatggcgacaatagcatgtttctcacccaagcacgagctggtgatgcactttgtggaata
ctttacgattacataaggcttgaagctccaccaacttga
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