Salvia hispanica (chia): 125196076
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Entry
125196076 CDS
T09851
Name
(RefSeq) protein CASP-like
KO
K09313
homeobox protein cut-like
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shis03000
]
125196076
Transcription factors [BR:
shis03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
125196076
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CASP_C
Thump_like
Motif
Other DBs
NCBI-GeneID:
125196076
NCBI-ProteinID:
XP_047950395
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All DBs
Position
6:11057085..11066206
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AA seq
689 aa
AA seq
DB search
MEGLQGGGGGGSEREKPNTSSTSAPVSAVATFWKDFDLEKERTILDEQGLRIAENQENSQ
KNRRKLAESTRDFKKASNEEKLALFNSLLKGYQEEVDKLTKRAKFGENAFLSIYQKLYEA
PDPYPVLNSVAEKDAKLFELESENRKMKVELEEFRTESTHLKNQQATIRRLEERTRQLEQ
QMEEKVKEIVEIKQRNLAEENQKTMEVLKERERMLQDQLRQAQESVSTMRKLHEFAQSQL
FELRAQSDEDGATKQSEVNLLMNEVEEAQTRLLSLEREKGLLRSQLQSANEESEHKRSDS
SDANTVLENSLSAKERIISELNTELHTIETTLSNEREQNLNELKKLKALLNEKELELEEL
KKEIQTRPTEKLVEDLRKKVKILQAVGYNSIEAEDWETATSGEEMSKLESLLLDKNRKME
HEVTQYKVKIAEKSSLLEAAEIKIKDLTTQIDEQQRLIQKLEDDILKGYSSNDKKGSFFN
DWDLSESGGTNQVENAEQRRAPADLDQSSMLKVICNQRDRFRARLRETEEEIRILNEKIG
SLTIELEKTKADNVKLYGKIRYVQDYNSEKVVSRGSKKYAEDLEGGFSSDVESKYKKIYE
DDINPFAAFSKKERDQRYKELGLRDKITLSSGRFLLGNKYARTFAFFYTIGLHILVFTCL
YRMSALSYLSHGPEETFTAENVVNLPHPQ
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtctgcaaggtggaggaggaggtggatcagagagagaaaagccaaacacatca
tcgacctctgcccctgtatccgctgttgctactttctggaaagattttgatttagagaaa
gaaaggaccatcttggatgaacaggggcttagaattgcagagaaccaggaaaacagtcag
aagaaccgtaggaagcttgccgagagcactagagacttcaagaaggcttcaaatgaagag
aagttggcattgttcaattcattacttaagggttatcaagaggaggttgataaacttacc
aagagagctaaatttggggaaaatgcttttcttagcatttaccagaaactttatgaagca
ccagacccttacccagttcttaattcagttgcagagaaggatgccaaattgtttgaactg
gagtctgaaaacagaaagatgaaggttgaacttgaggaattccgcactgaatcaactcac
ctgaaaaaccaacaagcaacaataagaagactagaagagcgcacccgtcagttagaacaa
cagatggaggaaaaagtgaaagaaattgttgagattaagcaacgcaatttggccgaagag
aatcagaaaactatggaagttctaaaagaaagggaacggatgttacaagatcaattgcgc
caagctcaagaaagtgtttccactatgcggaaacttcatgaatttgctcagagccagtta
tttgagcttcgtgcccaatcagatgaagatggggctacaaaacaatcagaagttaatctt
ttgatgaatgaagttgaagaagctcagactcgtcttttaagtcttgagagagaaaagggg
cttctgcggtcacagctacaatcagctaatgaagagagcgaacataagagaagtgatagt
tcagatgcaaacaccgttcttgagaattctcttagtgcaaaggaaaggataatctctgag
ctgaatacggaactacacactattgagacaacactatcaaatgaacgagaacaaaattta
aatgagctgaagaagttgaaggctttgctcaatgaaaaggaacttgaacttgaggaattg
aaaaaggagattcaaacacgaccaactgaaaaactagttgaggatttgcggaagaaagta
aaaattttgcaggctgttggctataattcaattgaagccgaggattgggaaacagctact
agcggggaagaaatgagcaaattggagtcattactcctagacaagaatcggaaaatggag
cacgaagtgactcagtataaggtcaaaattgccgaaaagtcctctttactggaagcagct
gaaattaagattaaagacttaacaacacagattgatgaacaacaaaggcttatccaaaaa
cttgaagatgatattctaaagggttacagttccaatgataaaaaaggcagcttcttcaat
gactgggacctgtcggaatctggagggacaaatcaagtcgagaatgcagaacaaaggcgt
gctcctgctgatttagaccaaagctctatgcttaaggtgatatgcaaccagcgtgatcga
tttcgggcacgtttgcgggagactgaagaggaaataagaatactgaatgagaagatagga
agccttaccatcgagctcgaaaaaacaaaggcagataatgtcaaactctatgggaaaata
cgctatgttcaggattataattctgagaaagttgtgtctagaggatcaaagaagtatgct
gaagatctggagggtggttttagttctgatgttgaatcaaagtataagaaaatatacgag
gacgatattaatccctttgcagcgttttcaaaaaaggaaagagatcagaggtacaaggaa
ctaggcttgagggacaaaattacccttagcagtggacggtttcttcttggaaacaagtat
gcgagaacctttgcgtttttctatacaataggattgcacatattggtatttacctgcctc
tacaggatgtctgccttgagctacctcagccacggacccgaagaaacctttactgcagaa
aatgtcgtcaatcttccacatcctcaatga
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